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Updated: May 17, 2026

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Viability Assays for Cells in Culture
Published on: January 20, 2014
Quantitative assessment of cell viability based on flow cytometry and microscopy
A Kummrow1, M Frankowski, N Bock
1Physikalisch-Technische Bundesanstalt, 10587 Berlin, Germany. andreas.kummrow@ptb.de
Summary
Flow cytometry and microscopy offer comparable cell viability measurements using fluorescence stains. Both methods accurately assess live and dead cells, showing minimal differences in peripheral blood monocytes and CD34-positive cells.
Area of Science:
- Immunology
- Cell Biology
- Biotechnology
Background:
- Accurate cell viability assessment is crucial in biological research and diagnostics.
- Flow cytometry and microscopy are common methods for determining cell viability.
- Standardization and comparison of these methods are essential for reliable results.
Purpose of the Study:
- To directly compare the accuracy and agreement of flow cytometry and microscopy for cell viability determination.
- To evaluate the performance of these methods using specific fluorescence viability stains.
- To assess the consistency of results across different cell types, including monocytes and CD34-positive cells.
Main Methods:
- Peripheral blood monocytes were isolated using density gradients and enriched via magnetic-activated cell sorting (MACS) or fluorescence-activated cell sorting (FACS) targeting CD14.
- Identical cell samples were analyzed using both flow cytometry and microscopy.
- Cell viability was determined using calcein acetoxy-methyl-ester (live stain) and ethidium homodimer-1 (dead stain).
- Over 1,000 cells were analyzed per sample to ensure statistical significance.
Main Results:
- Flow cytometry and microscopy demonstrated good agreement in cell viability measurements.
- Average differences in viability were 2.7 ± 1.4% for live staining and 1.7 ± 1.2% for dead staining.
- These deviations were comparable to the inherent measurement uncertainty, indicating equivalent performance.
- Consistent results were observed for both monocytes and MACS-enriched CD34-positive cells.
Conclusions:
- Flow cytometry and microscopy provide comparable and reliable cell viability data.
- Both methods are suitable for assessing cell viability in immunological and cell sorting applications.
- The choice between flow cytometry and microscopy can be based on experimental needs and available resources without compromising accuracy.
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