Related Experiment Video
Updated: May 17, 2026
09:37
An Integrated Approach for Microprotein Identification and Sequence Analysis
Published on: July 12, 2022
The UCSC Cancer Genomics Browser: update 2013
Mary Goldman1, Brian Craft, Teresa Swatloski
1Center for Biomolecular Science and Engineering, University of California at Santa Cruz, Santa Cruz, CA 95064, USA. mary@soe.ucsc.edu
Nucleic Acids Research
|October 31, 2012
Summary
The UCSC Cancer Genomics Browser offers integrated tools for analyzing cancer genomics and clinical data. It visualizes diverse datasets, enabling comparisons across cancer types and facilitating research discoveries.
Area of Science:
- Genomics
- Bioinformatics
- Cancer Research
Background:
- Cancer genomics data is complex and requires specialized tools for analysis.
- Integrating genomics data with clinical information is crucial for understanding cancer.
Purpose of the Study:
- To present the UCSC Cancer Genomics Browser as a comprehensive web-based platform.
- To highlight new features enhancing data visualization, analysis, and accessibility.
Main Methods:
- Web-based platform development and data integration.
- Visualization of whole-genome to base-pair level genomics data.
- Incorporation of biological pathways and clinical information for data sorting.
Main Results:
- The browser displays extensive cancer genomics data, including TCGA and other consortia datasets.
- New features include an interactive UI, data downloads, and an updated Tumor Image Browser.
- Enhanced security allows access to private datasets.
Conclusions:
- The UCSC Cancer Genomics Browser provides powerful tools for cancer genomics research.
- The platform's updates improve data accessibility, analysis capabilities, and user experience.
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