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Related Concept Videos

¹H NMR: Interpreting Distorted and Overlapping Signals01:02

¹H NMR: Interpreting Distorted and Overlapping Signals

Spin systems where the difference in chemical shifts of the coupled nuclei is greater than ten times J are called first-order spin systems. These nuclei are weakly coupled, and their chemical shifts and coupling constant can generally be estimated from the well-separated signals in the spectrum.
As Δν decreases and the signals move closer, the doublets appear increasingly distorted. The intensities of the inner lines increase at the cost of those of the outer lines as the signals are slanted or...
¹³C NMR: Distortionless Enhancement by Polarization Transfer (DEPT)01:20

¹³C NMR: Distortionless Enhancement by Polarization Transfer (DEPT)

When proton-coupled carbon-13 spectra are simplified by a broadband proton decoupling technique, structural information about the coupled protons is lost. Distortionless enhancement by polarization transfer (DEPT) is a technique that provides information on the number of hydrogens attached to each carbon in a molecule. While the DEPT experiment utilizes complex pulse sequences, the pulse delay and flip angle are specifically manipulated. The resulting signals have different phases depending on...
Aliasing01:18

Aliasing

Accurate signal sampling and reconstruction are crucial in various signal-processing applications. A time-domain signal's spectrum can be revealed using its Fourier transform. When this signal is sampled at a specific frequency, it results in multiple scaled replicas of the original spectrum in the frequency domain. The spacing of these replicas is determined by the sampling frequency.
If the sampling frequency is below the Nyquist rate, these replicas overlap, preventing the original signal...
Downsampling01:20

Downsampling

When considering a sampled sequence with zero values between sampling instants, one can replace it by taking every N-th value of the sequence. At these integer multiples of N, the original and sampled sequences coincide. This process, known as decimation, involves extracting every N-th sample from a sequence, thereby creating a more efficient sequence.
The Fourier transform of the decimated sequence reveals a combination of scaled and shifted versions of the original spectrum. This...
¹H NMR Chemical Shift Equivalence: Homotopic and Heterotopic Protons01:03

¹H NMR Chemical Shift Equivalence: Homotopic and Heterotopic Protons

Protons in identical electronic environments within a molecule are chemically equivalent and have the same chemical shift. The replacement test is a useful tool to identify chemical equivalence and predict NMR spectra. A substituent replaces each of the protons being examined and the resulting molecules are compared. If the same molecule is obtained, the protons are equivalent or homotopic. Replacement of any hydrogens in ethane by chlorine yields chloroethane because all six protons are...
NMR Spectroscopy: Chemical Shift Overview01:15

NMR Spectroscopy: Chemical Shift Overview

The position of the absorption signal of a sample is reported relative to the position of the signal of tetramethylsilane (TMS), which is added as an internal reference while recording spectra. The difference between the absorption frequencies of the sample and TMS (in Hz) is divided by the spectrometer operating frequency (in MHz) to obtain a dimensionless quantity called the chemical shift. It is reported on the δ (delta) scale and expressed in parts per million.
For instance, the proton...

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Related Experiment Video

Updated: May 16, 2026

Combined Invasive Subcortical and Non-invasive Surface Neurophysiological Recordings for the Assessment of Cognitive and Emotional Functions in Humans
08:25

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Published on: May 19, 2016

Subtraction artifacts and frequency (mis-)alignment in J-difference GABA editing.

C John Evans1, Nicolaas A J Puts, Siân E Robson

  • 1CUBRIC, School of Psychology, Cardiff University, Park Place, Cardiff, United Kingdom.

Journal of Magnetic Resonance Imaging : JMRI
|November 29, 2012
PubMed
Summary
This summary is machine-generated.

Pairwise alignment significantly improves the repeatability of gamma-aminobutyric acid (GABA) measurements in brain spectroscopy. Independent alignment, however, can introduce artifacts and reduce data reliability.

Keywords:
GABAMRSfrequency alignmentrepeatabilitysubtraction artifact

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Area of Science:

  • Neuroimaging
  • Magnetic Resonance Spectroscopy

Background:

  • γ-aminobutyric acid (GABA) is a key inhibitory neurotransmitter.
  • Accurate in vivo measurement of GABA is crucial for understanding neurological function and disease.
  • J-difference editing is a common technique for GABA quantification, but its spectral quality can be affected by magnetic field inhomogeneities.

Purpose of the Study:

  • To compare the repeatability of GABA measurements using J-difference editing before and after spectral realignment.
  • To evaluate the impact of different spectral alignment approaches (independent vs. pairwise) on GABA measurement repeatability.

Main Methods:

  • In vivo GABA measurements were performed in the occipital cortex, sensorimotor cortex, and dorsolateral prefrontal cortex (DLPFC).
  • Two alignment strategies were compared: independent alignment of each subspectrum and pairwise alignment of on/off subspectra.
  • Simulations were used to assess GABA quantification error under varying B0 drift conditions.

Main Results:

  • Pairwise alignment improved group mean coefficient of variation (CV) across all regions (occipital: 0.4%, sensorimotor: 1.1%, DLPFC: 1.1%).
  • Independent alignment led to subtraction artifacts and increased CV in the DLPFC by 9.4%.
  • Simulations showed GABA quantification error decreased from 4.5% without alignment to <1% with optimal (pairwise) alignment.

Conclusions:

  • Pairwise spectral alignment is a superior method for improving the repeatability of in vivo GABA spectroscopy.
  • Independent alignment of all subspectra can introduce artifacts and result in poorer repeatability compared to non-aligned data.