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Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
Published on: July 16, 2017
Functional comparison of protein domains within aPKCs involved in nucleocytoplasmic shuttling
Sebastian Seidl1, Ursula B Braun, Michael Leitges
1Biotechnology Centre of Oslo, University of Oslo , NO-0349, Oslo , Norway.
Abstract:
The atypical protein kinases C (PKC) isoforms ι and ζ play crucial roles in regulation of signaling pathways related to proliferation, differentiation and cell survival. Over the years several interaction partners and phosphorylation targets have been identified. However, little is known about the regulation of atypical aPKC isoforms. To address this question, we performed a comparative analysis of atypical aPKCι/λ and ζ in MDCK cells. By using green fluorescence protein (GFP) fusion proteins containing the full-length or truncated proteins, we were able to recognize differences in subcellular localization and nucleocytoplasmic shuttling of both isoforms. We show, that an earlier described nuclear localization sequence (NLS), plays a role in the regulation of atypical aPKCζ but not in aPKCι, despite the fact that it is present in both isoforms. Leptomycin B treatment induces accumulation of GFP-fusion protein of both isoforms in the nucleus. Regardless, the loss of the NLS only decreases shuttling of aPKCζ, while aPKCι remains unaffected. In addition, we identified the hinge region as a potential regulator of localization of atypical PKCs. With a set of chimeric proteins we show that the hinge region of aPKCι mediates nuclear localization. In contrast, the hinge region of aPKCζ causes exclusion from the nucleus, indicating two different mechanisms leading to isoform specific regulation. Taken together, we show for the first time, that the atypical isoforms aPKCι and ζ underly different mechanisms regarding their regulation of subcellular localization and translocation into the nucleus in MDCK cells.
Insights
Atypical protein kinase C (PKC) isoforms ι and ζ exhibit distinct subcellular localization and nuclear import regulation. Their differing hinge regions and nuclear localization sequences (NLS) control these unique cellular transport mechanisms.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Atypical protein kinases C (PKC) ι and ζ are vital for cell signaling, proliferation, differentiation, and survival.
- While interaction partners and targets are known, the regulation of atypical PKC isoforms remains poorly understood.
Purpose of the Study:
- To comparatively analyze the subcellular localization and nucleocytoplasmic shuttling of atypical protein kinase C (PKC) ι/λ and ζ isoforms.
- To elucidate the regulatory mechanisms governing the localization of these atypical PKC isoforms in MDCK cells.
Main Methods:
- Utilized green fluorescence protein (GFP) fusion proteins (full-length and truncated) to study subcellular localization and nucleocytoplasmic shuttling.
- Investigated the role of a nuclear localization sequence (NLS) and the hinge region in protein localization.
- Employed Leptomycin B treatment to assess nuclear accumulation.
Main Results:
- A previously identified NLS regulates atypical PKCζ but not PKCι, despite its presence in both.
- Leptomycin B treatment caused nuclear accumulation of both isoforms.
- The hinge region of PKCι mediates nuclear localization, while the hinge region of PKCζ promotes nuclear exclusion, revealing isoform-specific regulation.
Conclusions:
- Atypical PKCι and ζ isoforms are subject to distinct regulatory mechanisms governing their subcellular localization and nuclear translocation.
- Isoform-specific regulation of atypical PKCs is mediated by differences in their NLS and hinge regions.
- This study provides novel insights into the differential regulation of atypical PKC isoforms in mammalian cells.
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