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Related Concept Videos

Brain Imaging01:14

Brain Imaging

Brain imaging technologies provide critical insights into both the structure and function of the human brain, enabling medical professionals and researchers to diagnose, study, and treat neurological disorders or psychiatric disorders more effectively.
These technologies include computerized axial tomography (CAT or CT scans), positron-emission tomography (PET scans),  magnetic resonance imaging (MRI),  functional magnetic resonance imaging (fMRI), and Transcranial Magnetic Stimulation (TMS).

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Related Experiment Video

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Optical Clearing and Labeling for Light-sheet Fluorescence Microscopy in Large-scale Human Brain Imaging
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Optical Clearing and Labeling for Light-sheet Fluorescence Microscopy in Large-scale Human Brain Imaging

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101 labeled brain images and a consistent human cortical labeling protocol.

Arno Klein1, Jason Tourville

  • 1Department of Psychiatry and Behavioral Science, Stony Brook University School of Medicine Stony Brook, NY, USA ; Department of Psychiatry, Columbia University New York, NY, USA.

Frontiers in Neuroscience
|December 11, 2012
PubMed
Summary

The Mindboggle-101 dataset offers the largest collection of manually labeled human brain images. This resource aids in brain atlases, normative data, and developing automated brain labeling algorithms.

Keywords:
MRIanatomycerebral cortexhuman brainlabelingparcellationsegmentation

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Area of Science:

  • Neuroimaging
  • Computational Neuroscience
  • Medical Image Analysis

Background:

  • Accurate labeling of human brain anatomy is crucial for neuroscience research.
  • Existing datasets are limited in size, accessibility, and manual labeling detail.
  • Automated brain labeling methods require robust, validated datasets for development and evaluation.

Purpose of the Study:

  • Introduce the Mindboggle-101 dataset, the largest publicly available manually labeled human brain MRI dataset.
  • Present the Desikan-Killiany-Tourville (DKT) protocol for consistent and accurate cortical area labeling.
  • Provide benchmarks for evaluating automated brain registration and labeling algorithms.

Main Methods:

  • Manual labeling of macroscopic anatomy in 101 healthy participants' MRI scans.
  • Development of the DKT protocol using anatomical landmarks and automated label initialization.
  • Comparison of manual labels against automated labels from probabilistic and multi-atlas approaches.

Main Results:

  • The Mindboggle-101 dataset comprises 101 manually labeled brain MRIs.
  • The DKT protocol enhances ease, consistency, and accuracy in cortical labeling.
  • Established benchmarks for automated labeling algorithm evaluation.

Conclusions:

  • Mindboggle-101 serves as a valuable resource for brain atlases and normative morphometric data.
  • The dataset facilitates the development and validation of automated brain labeling techniques.
  • This work advances the field of human brain image analysis and computational neuroanatomy.