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Related Concept Videos

Exon Recombination02:32

Exon Recombination

The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes. 
Exon shuffling follows “splice frame rules.” Each exon has three reading...
Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
DNA Isolation01:24

DNA Isolation

DNA isolation protocols can be fast and straightforward or complex and time-consuming depending on the type and quality of DNA required for further processing. For example, plasmid DNA extraction is a bit more complicated than genomic DNA extraction because of the need for an appropriate lysis method to separate plasmid DNA from gDNA during isolation. However, for specific applications, such as long-range DNA sequencing that require a good yield of high- quality DNA samples, we need to follow...

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Related Experiment Video

Updated: May 16, 2026

Directed Evolution Method in Saccharomyces cerevisiae: Mutant Library Creation and Screening
10:50

Directed Evolution Method in Saccharomyces cerevisiae: Mutant Library Creation and Screening

Published on: April 1, 2016

Directed evolution of nucleotide-based libraries using lambda exonuclease.

Bee Nar Lim1, Yee Siew Choong, Asma Ismail

  • 1Institute for Research in Molecular Medicine, Universiti Sains Malaysia, Penang, Malaysia.

Biotechniques
|December 12, 2012
PubMed
Summary
This summary is machine-generated.

This study introduces a streamlined method for directed evolution, simplifying the creation of diverse nucleotide libraries. The new technique avoids complex steps, making protein engineering more efficient for researchers.

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Mutagenesis and Functional Selection Protocols for Directed Evolution of Proteins in E. coli
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Mutagenesis and Functional Selection Protocols for Directed Evolution of Proteins in E. coli

Published on: March 16, 2011

Area of Science:

  • Molecular Biology
  • Biotechnology
  • Protein Engineering

Background:

  • Directed evolution is crucial for tailoring protein traits, but conventional methods involve complex digestion and ligation steps.
  • Existing techniques for generating nucleotide diversity can be time-consuming and labor-intensive.

Purpose of the Study:

  • To develop a simplified and efficient method for generating diverse nucleotide libraries for directed evolution.
  • To demonstrate the utility of the new method for creating synthetic antibody libraries.

Main Methods:

  • Utilizes single-stranded DNA (ssDNA) as a starting template.
  • Employs PCR amplification with phosphorylated primers, lambda exonuclease treatment to create ssDNA, and Klenow fragment extension to generate double-stranded DNA (dsDNA).
  • Applies the method for gene shuffling and regional mutagenesis to create antibody libraries.

Main Results:

  • Successfully generated synthetic antibody libraries with high titers (2×10^8 for gene shuffled, 6×10^7 for regional mutagenesis).
  • Demonstrated the method's effectiveness in creating diverse nucleic acid libraries.

Conclusions:

  • The described method offers an efficient and convenient approach for generating diversity in nucleic acid libraries.
  • This technique is particularly advantageous for creating recombinant antibody libraries, streamlining the protein engineering workflow.