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Following the Dynamics of Structural Variants in Experimentally Evolved Populations
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Predictability of evolution depends nonmonotonically on population size.

Ivan G Szendro1, Jasper Franke, J Arjan G M de Visser

  • 1Institute of Theoretical Physics, University of Cologne, 50937 Cologne, Germany.

Proceedings of the National Academy of Sciences of the United States of America
|December 26, 2012
PubMed
Summary

Evolutionary predictability in Aspergillus niger shows a complex pattern with population size. Repeatability initially increases then decreases due to single and double mutation rates, challenging common assumptions about deterministic evolution.

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Area of Science:

  • Evolutionary Biology
  • Computational Biology
  • Microbial Genetics

Background:

  • Understanding the balance between contingency and determinism is crucial in evolutionary research.
  • Evolution experiments, particularly with microbes, often monitor adaptive change repeatability to assess predictability.
  • Previous studies suggest larger populations might lead to more deterministic evolutionary outcomes.

Purpose of the Study:

  • To computationally investigate evolutionary predictability using a detailed fitness landscape.
  • To quantify the repeatability of adaptive mutations in Aspergillus niger across varying population sizes.
  • To explore the influence of mutation supply rates on evolutionary predictability.

Main Methods:

  • Utilized an experimentally determined eight-locus fitness landscape for Aspergillus niger.
  • Employed computational simulations to model evolutionary trajectories and endpoints.
  • Defined and analyzed entropy measures to quantify evolutionary predictability and mutational pathways.

Main Results:

  • Evolutionary predictability exhibited a non-monotonic relationship with population size (N).
  • Predictability initially decreased and then increased with N, influenced by single (Nμ) and double (Nμ²) mutation supply rates.
  • The mutation rate (μ) significantly modulated the amplitude of this predictability pattern.

Conclusions:

  • The study challenges the notion of increasingly deterministic evolution in large populations.
  • Evolutionary predictability is shaped by a complex interplay between population size and mutation dynamics.
  • Findings are generalizable across different fitness landscapes, highlighting the robustness of observed patterns.