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Updated: May 15, 2026

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Sample Preparation for Endopeptidomic Analysis in Human Cerebrospinal Fluid
Published on: December 4, 2017
Cerebrospinal fluid proteome comparison between multiple sclerosis patients and controls.
A C Kroksveen1, A Guldbrandsen, C Vedeler
1The KG Jebsen Centre for MS-research, Department of Clinical Medicine, University of Bergen, Bergen, Norway. ann.kroksveen@med.uib.no
Acta Neurologica Scandinavica. Supplementum
|January 3, 2013
Summary
Researchers identified 32 significantly different proteins in cerebrospinal fluid (CSF) between relapsing-remitting multiple sclerosis (RRMS) patients and controls. These proteins may serve as diagnostic biomarkers for RRMS.
Area of Science:
- Proteomics
- Neuroimmunology
- Biomarker Discovery
Background:
- Multiple Sclerosis (MS) is a chronic inflammatory disease of the central nervous system.
- Relapsing-remitting MS (RRMS) is the most common form, characterized by distinct attacks and remissions.
- Identifying reliable biomarkers for RRMS is crucial for diagnosis and understanding disease pathogenesis.
Purpose of the Study:
- To identify proteins with differential abundance in cerebrospinal fluid (CSF) between RRMS patients and healthy controls.
- To discover potential diagnostic biomarkers for RRMS.
- To gain insights into the molecular mechanisms underlying RRMS pathogenesis.
Main Methods:
- Cerebrospinal fluid (CSF) samples from 17 RRMS patients and 17 controls were analyzed.
- Proteins were digested and analyzed using label-free liquid chromatography-mass spectrometry (LC-MS).
- Data analysis was performed using SearchGUI, PeptideShaker, and Progenesis software.
Main Results:
- A total of 291 proteins were identified in the CSF.
- 32 proteins showed significant differential abundance (P ≤ 0.05) between RRMS patients and controls.
- Included proteins previously associated with MS, such as immunoglobulin subunits and vitamin D-binding protein.
Conclusions:
- The study identified several differentially abundant proteins in the CSF of RRMS patients.
- These proteins represent potential biomarkers for RRMS diagnosis and therapeutic targets.
- Further validation in larger cohorts is necessary to confirm their clinical utility and role in disease pathogenesis.
Related Concept Videos
Multiple Sclerosis l: Introduction
Multiple sclerosis is a chronic autoimmune disease of the central nervous system (CNS) that affects the brain, spinal cord, and optic nerves. It is an inflammatory demyelinating disorder and a leading cause of neurological disability in young adults.EpidemiologyMS commonly begins between 20 and 40 years of age and is twice as common in women. Its exact cause remains unclear, but genetic susceptibility contributes, with higher risk in first-degree relatives and identical twins. A greater...
Cerebrospinal Fluid
Cerebrospinal fluid (CSF) is a colorless liquid that flows around the brain and the spinal cord, playing a vital role in the protection, support, and overall function of the central nervous system (CNS). CSF production, circulation, and absorption are tightly regulated processes essential for the brain and spinal cord to function properly.
CSF Production
CSF is produced mainly in the choroid plexus, a network of capillaries and ependymal cells located within the ventricular system of the brain.
CSF Production
CSF is produced mainly in the choroid plexus, a network of capillaries and ependymal cells located within the ventricular system of the brain.

