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Generation of Microtumors Using 3D Human Biogel Culture System and Patient-derived Glioblastoma Cells for Kinomic Profiling and Drug Response Testing
Published on: June 9, 2016
Impact of genetic targets on primary brain tumor therapy: what's ready for prime time?
O Zalatimo1, C M Zoccoli, A Patel
1Department of Neurosurgery, Penn State College of Medicine, Hershey Medical Center, EC 1001, 30 Hope Drive, Hershey, PA 17033, USA. ozz101@gmail.com
Abstract:
Primary brain tumors constitute a substantial public health problem with 66,290 cases diagnosed in the US in 2012, and 13,700 deaths recorded. With discovery of genetic factors associated with specific brain tumor subtypes, the goal of therapy is changing from treating a class of tumors to developing individualized therapies catering to the molecular composition of the actual tumor. For oligodendrogliomas, the loss of 1p/19q due to an unbalanced translocation improves both survival and the response to therapy, and is thus both a prognostic and a predictive marker. Several additional genetic alterations such as EGFR amplification, MGMT methylation, PDGFR activation, and 9p and 10q loss, have improved our understanding of the characteristics of these tumors and may help guide therapy in the future. For astrocytic tumors, MGMT is associated with a better prognosis and an improved response to temozolomide, and for all glial tumors, mutations in the IDH1 gene are possibly the most potent of good prognostic markers. Three of these markers - 1p/19q deletions, MGMT methylation status, and mutations in the IDH1 gene - are so potent that a new brain tumor subtype, the "triple negative" glioma (1p/19q intact, MGMT unmethylated, IDH1 non-mutated) has entered common parlance. Newer markers, such as CD 133, require additional investigation to determine their prognostic and predictive utility. In medulloblastomas, markers of WNT activation, MYCC/MCYN amplification, and TrkC expression levels are reliable prognostic indicators, but do not yet drive specific treatment selection. Many other proposed markers, such as 17q gain, TP53 mutations, and hMOF protein expression show promise, but are not yet ready for prime time. In this chapter, we focus on the markers that have shown convincing prognostic, predictive, and diagnostic value, and discuss potential markers that are being currently being intensively investigated. We also discuss serum profiling of tumors in an effort to discover additional potential markers.
Insights
Genetic markers are revolutionizing brain tumor treatment. Key markers like 1p/19q deletions, MGMT methylation, and IDH1 mutations are crucial for personalized therapies and improved patient outcomes in gliomas.
Area of Science:
- Neuro-oncology
- Molecular diagnostics
- Genomics
Background:
- Primary brain tumors represent a significant public health concern, with millions diagnosed annually.
- Advances in molecular biology have shifted focus from treating tumor types to tailoring therapies based on individual tumor molecular profiles.
- Specific genetic alterations are increasingly recognized as critical for prognosis and predicting treatment response.
Purpose of the Study:
- To review established and emerging genetic markers with prognostic, predictive, and diagnostic value in primary brain tumors.
- To highlight markers that are currently guiding clinical decisions and those under intensive investigation.
- To explore novel approaches like serum profiling for discovering new biomarkers.
Main Methods:
- Review of literature on genetic alterations in oligodendrogliomas, astrocytic tumors, and medulloblastomas.
- Analysis of the prognostic and predictive significance of markers such as 1p/19q deletions, MGMT methylation, IDH1 mutations, and others.
- Discussion of emerging markers and their potential clinical utility.
Main Results:
- 1p/19q deletions are prognostic and predictive in oligodendrogliomas.
- MGMT methylation and IDH1 mutations are potent prognostic markers for astrocytic tumors and gliomas.
- Established markers like 1p/19q deletions, MGMT methylation, and IDH1 mutations define the 'triple negative' glioma subtype.
- Markers for medulloblastomas (WNT activation, MYCC/MCYN amplification, TrkC expression) are prognostic but not yet treatment-driving.
- Newer markers (CD133, 17q gain, TP53 mutations) require further validation.
Conclusions:
- Genetic markers are transforming brain tumor management, enabling personalized medicine.
- Validated markers like 1p/19q, MGMT, and IDH1 are essential for current clinical practice.
- Ongoing research into novel biomarkers and serum profiling holds promise for future therapeutic strategies.
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