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Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
Published on: May 6, 2022
Correlation of peroxisome proliferator-activated receptor (PPAR-γ) mRNA expression with Pro12Ala polymorphism in
Rym Berhouma1, Soumaya Kouidhi, Myriam Ammar
1Laboratory of Genetics, Immunology and Human Pathologies, Faculty of Sciences of Tunis, University of El Manar 1, 2092, Tunis, Tunisia. berhoumar@gmail.com
Abstract:
Our study aimed to analyze whether the expression of PPARγ mRNA in subcutaneous adipocyte tissue correlates with Pro12Ala PPARγ2 polymorphism in the obesity context. We found that mRNA expression of PPARγ in subcutaneous adipose tissue was greater in obese subjects (P < 0.05) than in the nonobese control group. Concurrently, genotyping of the Pro12Ala polymorphism showed that obese subjects possess a significantly higher frequency of the Pro/Pro genotype than nonobese controls (90.5 vs 79.5%; P = 0.03), suggesting that this genotype is involved in an increased risk of obesity in the Tunisian population. Taken together, our results demonstrate that the Pro12 allele is accompanied by an overexpression of PPARγ mRNA in subcutaneous adipocyte tissue, suggesting that the PPARγ Pro12Ala variant may contribute to the observed variability in PPARγ mRNA expression and consequently in body mass index and insulin sensitivity in the general population.
Insights
Obese individuals show higher PPARγ mRNA expression and a greater frequency of the Pro/Pro genotype for the PPARγ Pro12Ala polymorphism, indicating a link to obesity risk.
Area of Science:
- Genetics
- Metabolism
- Endocrinology
Background:
- Peroxisome proliferator-activated receptor gamma (PPARγ) plays a crucial role in adipogenesis and metabolic regulation.
- The Pro12Ala polymorphism in the PPARγ2 gene is a common variant studied for its association with obesity and related metabolic traits.
Purpose of the Study:
- To investigate the correlation between PPARγ mRNA expression in subcutaneous adipose tissue and the Pro12Ala PPARγ2 polymorphism in the context of obesity.
- To determine the association of specific PPARγ genotypes with obesity risk in the Tunisian population.
Main Methods:
- Quantitative analysis of PPARγ mRNA expression in subcutaneous adipose tissue from obese and nonobese subjects.
- Genotyping of the Pro12Ala polymorphism in the PPARγ2 gene using established methods.
- Statistical analysis to compare gene expression levels and genotype frequencies between groups.
Main Results:
- PPARγ mRNA expression was significantly higher in subcutaneous adipose tissue of obese subjects compared to nonobese controls (P < 0.05).
- Obese subjects exhibited a significantly higher frequency of the Pro/Pro genotype (90.5%) compared to nonobese controls (79.5%) for the Pro12Ala polymorphism (P = 0.03).
- The Pro12 allele was associated with increased PPARγ mRNA expression in subcutaneous adipocytes.
Conclusions:
- The Pro12Ala polymorphism, particularly the Pro/Pro genotype, is associated with an increased risk of obesity in the Tunisian population.
- The Pro12 allele of PPARγ is linked to PPARγ mRNA overexpression in subcutaneous adipose tissue.
- The PPARγ Pro12Ala variant may contribute to variations in PPARγ mRNA expression, body mass index, and insulin sensitivity in the general population.
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