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Research resource: tissue- and pathway-specific metabolomic profiles of the steroid receptor coactivator (SRC) family
Brian York1, Jørn V Sagen, Anna Tsimelzon
1Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Abstract:
The rapidly growing family of transcriptional coregulators includes coactivators that promote transcription and corepressors that harbor the opposing function. In recent years, coregulators have emerged as important regulators of metabolic homeostasis, including the p160 steroid receptor coactivator (SRC) family. Members of the SRC family have been ascribed important roles in control of gluconeogenesis, fat absorption and storage in the liver, and fatty acid oxidation in skeletal muscle. To provide a deeper and more granular understanding of the metabolic impact of the SRC family members, we performed targeted metabolomic analyses of key metabolic byproducts of glucose, fatty acid, and amino acid metabolism in mice with global knockouts (KOs) of SRC-1, SRC-2, or SRC-3. We measured amino acids, acyl carnitines, and organic acids in five tissues with key metabolic functions (liver, heart, skeletal muscle, brain, plasma) isolated from SRC-1, -2, or -3 KO mice and their wild-type littermates under fed and fasted conditions, thereby unveiling unique metabolic functions of each SRC. Specifically, SRC-1 ablation revealed the most significant impact on hepatic metabolism, whereas SRC-2 appeared to impact cardiac metabolism. Conversely, ablation of SRC-3 primarily affected brain and skeletal muscle metabolism. Surprisingly, we identified very few metabolites that changed universally across the three SRC KO models. The findings of this Research Resource demonstrate that coactivator function has very limited metabolic redundancy even within the homologous SRC family. Furthermore, this work also demonstrates the use of metabolomics as a means for identifying novel metabolic regulatory functions of transcriptional coregulators.
Insights
Transcriptional coregulators, including the SRC family, regulate metabolism. This study used metabolomics in knockout mice to reveal unique metabolic roles for SRC-1, SRC-2, and SRC-3 in different tissues.
Area of Science:
- Molecular Biology
- Metabolic Research
- Genomics
Background:
- Transcriptional coregulators are key regulators of gene expression.
- The p160 Steroid Receptor Coactivator (SRC) family plays critical roles in metabolic homeostasis.
- Previous studies linked SRC members to gluconeogenesis, lipid metabolism, and fatty acid oxidation.
Purpose of the Study:
- To comprehensively analyze the metabolic impact of individual SRC family members.
- To understand the tissue-specific functions of SRC-1, SRC-2, and SRC-3.
- To investigate metabolic redundancy within the SRC family.
Main Methods:
- Targeted metabolomic analysis of glucose, fatty acid, and amino acid byproducts.
- Analysis of five key metabolic tissues (liver, heart, skeletal muscle, brain, plasma) from global SRC knockout (KO) mice and wild-type littermates.
- Measurements under both fed and fasted conditions.
Main Results:
- SRC-1 ablation significantly impacted hepatic metabolism.
- SRC-2 deficiency primarily affected cardiac metabolism.
- SRC-3 knockout predominantly influenced brain and skeletal muscle metabolism.
- Few universal metabolic changes were observed across all three SRC KO models, indicating limited redundancy.
Conclusions:
- Individual SRC family members possess distinct and non-redundant metabolic functions.
- Metabolomics is a powerful tool for uncovering novel regulatory roles of transcriptional coregulators in metabolism.
- This research provides a detailed metabolic map of SRC family member functions.

