Related Experiment Video
Updated: May 15, 2026

Immunopeptidomics: Isolation of Mouse and Human MHC Class I- and II-Associated Peptides for Mass Spectrometry Analysis
Published on: October 15, 2021
In vitro digestion with proteases producing MHC class II ligands
Mira Tohmé1, Sophia Maschalidi1, Bénédicte Manoury2
1Sorbonne Paris Cité, Faculté de médecine René Descartes, INSERM U1013 and Université Paris Descartes, Paris, France.
Researchers developed methods to track how proteases in endosomes generate peptides. This is crucial for understanding T cell interactions, improving vaccines, and preventing autoimmune diseases by monitoring MHC class II ligand production.
Area of Science:
- Immunology
- Cell Biology
- Biochemistry
Background:
- Proteases generate peptides that bind to MHC class II molecules, enabling interaction with CD4(+) T cells.
- These proteases function within specialized organelles, endosomes and lysosomes, of professional antigen-presenting cells (pAPCs).
- Understanding endosomal protease activity is vital for vaccine development and autoimmune disease prevention.
Purpose of the Study:
- To identify endosomal proteases responsible for producing antigenic peptides.
- To develop and validate techniques for monitoring MHC class II ligand production.
Main Methods:
- In vitro protein digestion assays using recombinant proteases.
- Digestion assays utilizing purified endosomes and lysosomes.
- T cell stimulation assays to assess peptide presentation.
Main Results:
- Established a panel of techniques to monitor MHC class II ligand generation.
- Demonstrated the utility of these methods in studying protease activity within antigen-presenting cells.
Conclusions:
- The developed methods enable effective monitoring of MHC class II ligand production.
- This research provides a foundation for advancing vaccine strategies and understanding autoimmune pathologies.
Related Concept Videos
Antigen Processing Pathways
MHC Class I: Presenting Endogenous...
Antigens Involved in Adaptive Immunity
Complete Antigens
Complete antigens possess both immunogenicity and reactivity.
Protein Digestion
Intralumenal Vesicles and Multivesicular Bodies

