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Updated: May 15, 2026

Determining Genome-wide Transcript Decay Rates in Proliferating and Quiescent Human Fibroblasts
Published on: January 2, 2018
Cytoplasmic organelles on the road to mRNA decay
Dominique Weil1, Julie Hollien
1UPMC Univ Paris 06, CNRS-FRE 3402, Paris cedex , France.
Abstract:
Localization of both mRNAs and mRNA decay factors to internal membranes of eukaryotic cells provides a means of coordinately regulating mRNAs with common functions as well as coupling organelle function to mRNA turnover. The classic mechanism of mRNA localization to membranes is the signal sequence-dependent targeting of mRNAs encoding membrane and secreted proteins to the cytoplasmic surface of the endoplasmic reticulum. More recently, however, mRNAs encoding proteins with cytosolic or nuclear functions have been found associated with various organelles, in many cases through unknown mechanisms. Furthermore, there are several types of RNA granules, many of which are sites of mRNA degradation; these are frequently found associated with membrane-bound organelles such as endosomes and mitochondria. In this review we summarize recent findings that link organelle function and mRNA localization to mRNA decay. This article is part of a Special Issue entitled: RNA Decay mechanisms.
Insights
Messenger RNA (mRNA) localization to internal cell membranes influences mRNA decay and organelle function. This review explores how organelle-associated mRNA decay is regulated.
Area of Science:
- Molecular Biology
- Cell Biology
- RNA Biology
Background:
- mRNA localization to internal membranes coordinates gene expression and organelle function.
- While ER targeting is classic, other organelles also associate with mRNAs via unknown mechanisms.
- RNA granules, sites of mRNA degradation, often associate with organelles like endosomes and mitochondria.
Purpose of the Study:
- To review recent findings on the link between organelle function and mRNA localization.
- To summarize the connection between organelle-associated mRNA decay and cellular processes.
Main Methods:
- Literature review of recent findings.
- Synthesis of data on mRNA localization and decay mechanisms.
- Analysis of the role of organelles in mRNA turnover.
Main Results:
- mRNA localization to internal membranes is a key regulatory mechanism.
- Organelle association influences mRNA decay rates and patterns.
- RNA granules are frequently found near membrane-bound organelles, indicating functional links.
Conclusions:
- Organelle function is intricately linked to mRNA localization and decay.
- Understanding these connections is crucial for comprehending cellular regulation.
- Further research is needed to elucidate the mechanisms of organelle-mediated mRNA decay.
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