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Updated: May 14, 2026

Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
Epigenetic inactivation of ADAMTS9 via promoter methylation in multiple myeloma
Ling Peng1, Zesong Yang, Cui Tan
1Department of Hematology, The First Affiliated Hospital of Chongqing Medical University, Chongqing 400016, PR China.
Abstract:
A disintegrin‑like and metalloprotease with thrombospondin type Ⅰ motifs (ADAMTS) are a family of 19 secreted mammalian metalloproteases. ADAMTS9 was reported to be a novel tumor suppressor gene and is downregulated in various types of human cancer due to hypermethylation of promoter CpG islands. In the present study, the silencing mechanism of the ADAMTS9 gene was analyzed in the multiple myeloma (MM) cell lines, KM3 and RPMI‑8226. Control and MM samples were obtained by conventional bone marrow (BM) biopsy of normal and MM adult BM, respectively. RT‑PCR revealed a high expression of the ADAMTS9 gene in normal samples and RPMI‑8226 cells while marked gene silencing of ADAMTS9 was observed in MM patients and KM3 cells. Promoter methylation of ADAMTS9 was detected in the KM3 cell line and 66% (37/56) MM patients by methylation‑specific PCR. In addition, the DNA demethylating agent, 5‑aza‑2'‑deoxycytidine and trichostatin A restored ADAMTS9 expression by suppressing promoter methylation in KM3 cells. Ectopic expression of ADAMTS9 in ADAMTS9‑silenced MM cells was found to significantly suppress cell colony formation and proliferation. In the present study, DNA methylation was found to play a key role in ADAMTS9 gene silencing and the biological behavior of myeloma cells. The results demonstrate that ADAMTS9 silencing by methylation may be a novel tumor marker for MM and the applicability of demethylating agents in the treatment of MM.
Insights
ADAMTS9 gene silencing by DNA methylation is prevalent in multiple myeloma (MM). Restoring ADAMTS9 expression suppressed MM cell growth, suggesting its potential as a tumor marker and therapeutic target.
Area of Science:
- Molecular Biology
- Oncology
- Genetics
Background:
- ADAMTS9 is a tumor suppressor gene often downregulated in cancers via promoter hypermethylation.
- Multiple myeloma (MM) is a cancer of plasma cells with complex genetic alterations.
- Understanding gene silencing mechanisms in MM is crucial for developing targeted therapies.
Purpose of the Study:
- To investigate the silencing mechanism of the ADAMTS9 gene in multiple myeloma (MM) cell lines.
- To determine the role of DNA methylation in ADAMTS9 gene silencing in MM.
- To evaluate the therapeutic potential of restoring ADAMTS9 expression in MM.
Main Methods:
- Analysis of ADAMTS9 gene expression using RT-PCR in normal and MM samples.
- Detection of ADAMTS9 promoter methylation using methylation-specific PCR.
- Treatment of MM cells with DNA demethylating agents (5-aza-2'-deoxycytidine and trichostatin A).
- Assessment of cell proliferation and colony formation after ectopic ADAMTS9 expression.
Main Results:
- ADAMTS9 was highly expressed in normal samples and RPMI-8226 cells but silenced in KM3 cells and most MM patients.
- Promoter methylation of ADAMTS9 was detected in KM3 cells and 66% of MM patients.
- Demethylating agents restored ADAMTS9 expression in KM3 cells by suppressing promoter methylation.
- Ectopic expression of ADAMTS9 significantly inhibited MM cell colony formation and proliferation.
Conclusions:
- DNA methylation plays a critical role in ADAMTS9 gene silencing and the biological behavior of myeloma cells.
- ADAMTS9 silencing by methylation may serve as a novel tumor marker for MM.
- Demethylating agents show potential applicability in the treatment of MM.
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