Related Experiment Video
Updated: May 12, 2026

Functional Characterization of RING-Type E3 Ubiquitin Ligases In Vitro and In Planta
Published on: December 5, 2019
A pathogen type III effector with a novel E3 ubiquitin ligase architecture
Alexander U Singer1, Sebastian Schulze, Tatiana Skarina
1Banting and Best Department for Medical Research, University of Toronto, CH Best Institute, Toronto, Ontario, Canada.
The novel type III effector XopL from Xanthomonas campestris pv. vesicatoria possesses E3 ubiquitin ligase activity, inducing plant cell death and subverting immunity through a unique structural fold. This bacterial effector mimics eukaryote-specific ubiquitination, highlighting effector diversity.
Area of Science:
- Microbiology
- Plant Pathology
- Molecular Biology
Background:
- Type III effectors are bacterial virulence factors delivered into host cells to manipulate host processes.
- XopL is a novel type III effector from the plant pathogen Xanthomonas campestris pv. vesicatoria.
Purpose of the Study:
- To investigate the function and structural characteristics of the novel type III effector XopL.
- To determine the role of XopL's E3 ubiquitin ligase activity in plant immunity and cell death.
Main Methods:
- In vitro and in planta assays to assess E3 ubiquitin ligase activity.
- Crystal structure determination of XopL's C-terminal and N-terminal domains.
- Site-directed mutagenesis to investigate the role of specific domains and amino acids.
Main Results:
- XopL exhibits E3 ubiquitin ligase activity, inducing plant cell death and subverting plant immunity.
- The C-terminal region of XopL, featuring a novel XL-box fold, is responsible for E3 ligase activity and interacts with plant E2 enzymes.
- The N-terminal LRR domain is involved in suppressing PAMP responses, while E3 ligase activity is essential for plant cell death.
Conclusions:
- XopL possesses a unique E3 ubiquitin ligase domain with an unprecedented structural fold (XL-box).
- XopL utilizes a non-catalytic mechanism for ubiquitination and its activity is crucial for virulence.
- The study reveals novel insights into the functional and structural diversity of bacterial type III effectors.
Related Concept Videos
Protein Complexes with Interchangeable Parts
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The Proteasome
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. A series of enzymes carry out the ubiquitination of the target proteins - E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Export of Misfolded Proteins out of the ER
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
The Proteasome
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3 (ubiquitin...

