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Updated: May 14, 2026

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Published on: March 14, 2021
TORC1-regulated protein kinase Npr1 phosphorylates Orm to stimulate complex sphingolipid synthesis
Mitsugu Shimobayashi1, Wolfgang Oppliger, Suzette Moes
1Biozentrum, University of Basel, 4056 Basel, Switzerland.
Abstract:
The evolutionarily conserved Orm1 and Orm2 proteins mediate sphingolipid homeostasis. However, the homologous Orm proteins and the signaling pathways modulating their phosphorylation and function are incompletely characterized. Here we demonstrate that inhibition of nutrient-sensitive target of rapamycin complex 1 (TORC1) stimulates Orm phosphorylation and synthesis of complex sphingolipids in Saccharomyces cerevisiae. TORC1 inhibition activates the kinase Npr1 that directly phosphorylates and activates the Orm proteins. Npr1-phosphorylated Orm1 and Orm2 stimulate de novo synthesis of complex sphingolipids downstream of serine palmitoyltransferase. Complex sphingolipids in turn stimulate plasma membrane localization and activity of the nutrient scavenging general amino acid permease 1. Thus activation of Orm and complex sphingolipid synthesis upon TORC1 inhibition is a physiological response to starvation.
Insights
Nutrient-sensitive target of rapamycin complex 1 (TORC1) inhibition activates the kinase Npr1, which phosphorylates Orm proteins. This stimulates sphingolipid synthesis, a starvation response in yeast.
Area of Science:
- Cellular biology
- Biochemistry
- Molecular biology
Background:
- Orm1 and Orm2 proteins are crucial for sphingolipid homeostasis but their regulation is not fully understood.
- Signaling pathways affecting Orm protein phosphorylation and function require further characterization.
Purpose of the Study:
- To investigate the role of nutrient-sensitive target of rapamycin complex 1 (TORC1) signaling in regulating Orm proteins.
- To elucidate the mechanism by which TORC1 inhibition impacts sphingolipid synthesis and function.
Main Methods:
- Utilized Saccharomyces cerevisiae as a model organism.
- Investigated protein phosphorylation using biochemical assays.
- Analyzed sphingolipid synthesis pathways.
- Examined protein localization and activity using cell biology techniques.
Main Results:
- TORC1 inhibition leads to Orm protein phosphorylation and increased synthesis of complex sphingolipids.
- The kinase Npr1 directly phosphorylates and activates Orm proteins upon TORC1 inhibition.
- Activated Orm proteins stimulate de novo sphingolipid synthesis downstream of serine palmitoyltransferase.
- Complex sphingolipids enhance the plasma membrane localization and activity of the general amino acid permease 1.
Conclusions:
- TORC1 signaling pathway regulates Orm proteins and sphingolipid homeostasis in yeast.
- Npr1-mediated phosphorylation of Orm proteins is a key step in response to nutrient starvation.
- The Orm-sphingolipid pathway plays a vital role in nutrient scavenging during starvation.
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