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A User-friendly and Powerful R Analysis of Large-scale Datasets
Published on: November 4, 2025
displayHTS: a R package for displaying data and results from high-throughput screening experiments.
Xiaohua Douglas Zhang1, Zhaozhi Zhang
1Early Development Statistics, BARDS, Merck Research Laboratories, West Point, PA 19486, USA. xiaohua_zhang@merck.com
Bioinformatics (Oxford, England)
|February 12, 2013
Summary
The displayHTS R package offers new visualizations for high-throughput screening (HTS) data. These tools improve the analysis and interpretation of experimental results for drug discovery.
Area of Science:
- Bioinformatics
- Computational Biology
- Pharmacology
Background:
- High-throughput screening (HTS) generates large datasets requiring effective visualization.
- Standard visualization methods may not capture all critical features of HTS data.
- Accurate interpretation of HTS results is crucial for identifying potential drug candidates.
Purpose of the Study:
- To introduce the displayHTS R package for advanced visualization of HTS data.
- To provide novel graphical methods for HTS data exploration and hit selection.
- To enhance the understanding of HTS experimental outcomes through improved figures.
Main Methods:
- Implementation of recently developed visualization methods in an R package.
- Development of distinctive graphics including plate-well series plots, plate images, and dual-flashlight plots.
- Inclusion of commonly used figures such as volcano plots and plate correlation plots.
Main Results:
- The displayHTS package provides a comprehensive suite of tools for HTS data visualization.
- Novel plots facilitate the identification of patterns and outliers in screening data.
- Standard plots are also available for familiar data exploration.
Conclusions:
- The displayHTS R package significantly aids in the visualization and interpretation of HTS data.
- These visualization tools are critical for effective hit selection and analysis in drug discovery.
- The package enhances the ability to display important features of HTS data and results.

