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Modeling The Lifecycle Of Ebola Virus Under Biosafety Level 2 Conditions With Virus-like Particles Containing Tetracistronic Minigenomes
Published on: September 27, 2014
Random modelling of contagious diseases
J Demongeot1, O Hansen, H Hessami
1AGIM, FRE, CNRS 3405, Faculty of Medicine of Grenoble, University J. Fourier, 38700 La Tronche, France. Jacques.Demongeot@yahoo.fr
Abstract:
Modelling contagious diseases needs to include a mechanistic knowledge about contacts between hosts and pathogens as specific as possible, e.g., by incorporating in the model information about social networks through which the disease spreads. The unknown part concerning the contact mechanism can be modelled using a stochastic approach. For that purpose, we revisit SIR models by introducing first a microscopic stochastic version of the contacts between individuals of different populations (namely Susceptible, Infective and Recovering), then by adding a random perturbation in the vicinity of the endemic fixed point of the SIR model and eventually by introducing the definition of various types of random social networks. We propose as example of application to contagious diseases the HIV, and we show that a micro-simulation of individual based modelling (IBM) type can reproduce the current stable incidence of the HIV epidemic in a population of HIV-positive men having sex with men (MSM).
Insights
This study introduces a stochastic SIR model incorporating social networks to simulate disease spread. Micro-simulations accurately reproduced HIV incidence in men who have sex with men (MSM).
Area of Science:
- Epidemiology
- Mathematical Biology
- Network Science
Background:
- Accurate modeling of contagious diseases requires detailed contact mechanisms.
- Social networks significantly influence disease transmission dynamics.
- Stochastic approaches can model uncertainties in host-pathogen contact.
Purpose of the Study:
- To develop a stochastic SIR model integrating social network structures.
- To enhance disease modeling with microscopic contact details.
- To apply the model to understand HIV transmission dynamics.
Main Methods:
- Revisiting SIR models with a microscopic stochastic contact version.
- Introducing random perturbations near the endemic fixed point.
- Defining and incorporating various random social network types.
- Utilizing individual-based modeling (IBM) for micro-simulations.
Main Results:
- The proposed stochastic SIR model successfully incorporates social networks.
- Micro-simulations demonstrated the ability to reproduce stable disease incidence.
- The model accurately replicated current HIV epidemic incidence in MSM populations.
Conclusions:
- Stochastic SIR models with social networks offer a powerful tool for disease modeling.
- Individual-based modeling provides realistic simulations of epidemic dynamics.
- This approach is effective for understanding and predicting HIV spread in specific populations.
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