Related Experiment Video
Updated: May 11, 2026

10:09
Isolation and Cultivation of Neural Progenitors Followed by Chromatin-Immunoprecipitation of Histone 3 Lysine 79 Dimethylation Mark
Published on: January 26, 2018
On your histone mark, SET, methylate!
1Newcastle Cancer Centre at the Northern Institute for Cancer Research; Newcastle University, Newcastle upon Tyne, England. olivier.binda@newcastle.ac.uk
Epigenetics
|April 30, 2013
Summary
Lysine methylation, a key protein modification, is regulated by other modifications. This cross-talk impacts both histone and non-histone proteins, influencing cellular functions.
Area of Science:
- Biochemistry
- Molecular Biology
- Epigenetics
Background:
- Lysine methylation is a crucial posttranslational modification impacting diverse cellular processes.
- This modification extends beyond epigenetic regulation, influencing non-histone proteins.
- Interactions between lysine methyltransferases and their substrates are modulated by surrounding posttranslational modifications.
Purpose of the Study:
- To discuss the cross-talk between different lysine methylation sites.
- To explore how posttranslational modifications regulate lysine methylation events.
- To examine the in cis effects of acetylation, phosphorylation, and other methylations on lysine methylation.
Main Methods:
- Review of existing literature on lysine methylation and its regulation.
- Analysis of specific examples of cross-talk in histone and non-histone proteins.
- Discussion of the impact of various posttranslational modifications on lysine methylation.
Main Results:
- Demonstration of regulatory cross-talk between lysine methylation sites on histones (e.g., H3K4me3 and H3K9me).
- Examples of similar cross-talk affecting non-histone proteins like p53 and DNMT1.
- Identification of 'in cis' effects of acetylation, phosphorylation, and methylation on lysine methylation.
Conclusions:
- Posttranslational modifications play a critical role in regulating lysine methylation.
- This regulatory network is essential for both epigenetic and non-epigenetic cellular functions.
- Understanding these cross-talk mechanisms provides insights into protein function and regulation.
Related Concept Videos
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Spreading of Chromatin Modifications
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Writers
The writer is an enzyme that can...
Heterochromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Heterochromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Inheritance of Chromatin Structures
Epigenetics is the study of inherited changes in a cell's phenotype without changing the DNA sequences. It provides a form of memory for the differential gene expression pattern to maintain cell lineage, position-effect variegation, dosage compensation, and maintenance of chromatin structures such as telomeres and centromeres. For example, the structure and location of the centromere on chromosomes are epigenetically inherited. Its functionality is not dictated or ensured by the underlying DNA...

