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Updated: May 11, 2026

Genotypic Inference of HIV-1 Tropism Using Population-based Sequencing of V3
Published on: December 27, 2010
Circulation of two mumps virus genotypes in an unimmunized population in India
Sunil R Vaidya1, Deepika T Chowdhury, Neelakshi S Kumbhar
1National Institute of Virology, Pune, India. suravaidya@yahoo.com
Abstract:
Two separate outbreaks of fever with parotitis were reported from the Apsinga and Pimpla villages in the Osmanabad district of the Maharashtra State, India during February and March 2012. Meningo-encephalitis was noted in two patients resulting in the death of an 11-year male. Samples of blood and throat swabs were collected from patients with fever and parotitis. Serum samples from suspected (n=62) and convalescent (n=19) patients were tested for mumps virus specific IgM and/or IgG antibodies. Mumps virus specific IgM antibodies were detected in 44 of 62 serum samples (71%). Of the 19 convalescent phase sera 16 had both, anti-mumps virus IgM and IgG antibodies. Twenty-eight throat swabs collected from patients with parotitis were tested by RT-PCR for the SH gene. Twenty-three specimens were found to be positive and nucleotide sequencing of the amplified PCR products revealed circulation of two distinct genotypes that were village specific. Mumps virus genotype C (n=18) was detected in Apsinga village and genotype G (n=5) in Pimpla village. Two mumps virus isolates were also obtained using Vero cells. This is the first report from India confirming simultaneous circulation of mumps virus genotype C in one village and the G genotype in another village only 37 km away.
Insights
Two distinct mumps virus genotypes, C and G, were identified in separate Indian villages during 2012 outbreaks. This study confirms the simultaneous circulation of these mumps virus strains in close proximity.
Area of Science:
- Virology
- Epidemiology
- Public Health
Background:
- Mumps outbreaks with severe complications, including meningo-encephalitis and fatalities, occurred in Maharashtra, India.
- Limited data exists on mumps virus genotypes circulating in India.
Purpose of the Study:
- To investigate the mumps virus genotypes responsible for outbreaks in Apsinga and Pimpla villages.
- To confirm mumps virus infection in affected individuals.
Main Methods:
- Serological testing for mumps virus-specific IgM and IgG antibodies in serum samples.
- Reverse transcription-polymerase chain reaction (RT-PCR) targeting the SH gene of mumps virus in throat swabs.
- Nucleotide sequencing of amplified PCR products to determine genotypes.
- Isolation of mumps virus using Vero cell cultures.
Main Results:
- Mumps virus-specific IgM antibodies were detected in 71% (44/62) of suspected patients.
- RT-PCR confirmed mumps virus in 23 out of 28 throat swabs.
- Nucleotide sequencing revealed two distinct village-specific mumps virus genotypes: genotype C in Apsinga (18/23) and genotype G in Pimpla (5/23).
- Two mumps virus isolates were successfully cultured.
Conclusions:
- This study provides the first evidence of simultaneous circulation of mumps virus genotypes C and G in geographically close villages in India.
- The findings highlight the genetic diversity of mumps virus in India and underscore the need for continued surveillance.
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