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Array Comparative Genomic Hybridization (Array CGH) for Detection of Genomic Copy Number Variants
Published on: February 21, 2015
Report of interstitial 22q13.1q13.2 microduplication in two siblings with distinctive dysmorphic features, heart
Elisa Rahikkala1, Linda M Forsström, Hannaleena Kokkonen
1Department of Clinical Genetics, Oulu University Hospital, University of Oulu, Oulu, Finland. elisa.rahikkala@ppshp.fi
Insights
A rare 4 Mb duplication at 22q13.1q13.2 caused distinct developmental issues in siblings, including hypotonia, heart defects, and intellectual disability. This genetic finding highlights a critical region for neurodevelopmental disorders.
Area of Science:
- Genetics
- Developmental Biology
- Medical Genetics
Background:
- Submicroscopic chromosomal duplications can lead to complex genetic disorders.
- Understanding the phenotypic spectrum of 22q13 duplications is crucial for diagnosis and management.
Observation:
- Two siblings presented with a shared 4 Mb duplication at 22q13.1q13.2.
- Clinical features included infantile hypotonia, delayed milestones, congenital heart defects, growth deficiency, and distinctive craniofacial dysmorphism.
- Both siblings exhibited moderate intellectual disability and a short attention span.
Findings:
- Whole genome microarray comparative genomic hybridization (array CGH) identified the 4 Mb interstitial duplication at 22q13.1q13.2 in both affected children.
- Fluorescence in situ hybridization (FISH) confirmed the duplication and revealed a balanced submicroscopic insertion in the father, explaining the unbalanced inheritance.
- The father was identified as a carrier of a balanced interchromosomal insertion of 22q13 into chromosome 11q23.
Implications:
- This case refines the critical region at 22q13.1q13.2 associated with specific developmental and physical anomalies.
- Identifies a potential link between 22q13 duplications and hippocampal malformation, psychiatric symptoms, and characteristic facial features.
- Emphasizes the importance of advanced genetic testing, like array CGH and FISH, for diagnosing complex genetic conditions and identifying carrier parents.
Abstract:
We present two siblings (a boy and a girl) with a submicroscopic 4 Mb duplication at 22q13.1q13.2. Both children manifested infantile hypotonia and delayed motor milestones, congenital heart defect, growth deficiency, and strikingly similar and distinctive craniofacial dysmorphism including brachycephaly, blepharophimosis, short broad-based nose and wide mouth with thin upper lip. The boy had also a submucous cleft palate. Both had fair skin and hair compared with their parents. Both had moderate mental retardation associated with a short attention span. A 4-Mb interstitial duplication at 22q13.1q13.2 was detected by whole genome microarray comparative genomic hybridisation (array CGH) in both children. The duplication was confirmed by fluorescence in situ hybridisation (FISH) analysis. Their parents had normal array CGH results. FISH analysis revealed that the father was a carrier of a balanced interchromosomal submicroscopic insertion of 22q13 into chromosome 11q23, explaining the unbalanced aberration detected in both children. This report narrows down the critical region at 22q13.1q13.2, which is associated with mental retardation, pre- and post-natal growth retardation, hippocampal malformation, psychiatric symptoms such as short attention span and facial dysmorphism including hypertelorism, epicanthal folds and low set/abnormal ears.
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