Related Experiment Video
Updated: May 10, 2026

Characterization, Quantification and Compound-specific Isotopic Analysis of Pyrogenic Carbon Using Benzene Polycarboxylic Acids (BPCA)
Published on: May 16, 2016
Bacterial community composition of anthropogenic biochar and Amazonian anthrosols assessed by 16S rRNA gene 454
Rodrigo Gouvêa Taketani1, Amanda Barbosa Lima, Ederson da Conceição Jesus
1Laboratory of Cellular and Molecular Biology, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, Piracicaba, SP, Brazil. rgtaketani@yahoo.com.br
Abstract:
Biochar (BC) is a common minor constituent of soils and is usually derived from the burning of wood materials. In the case of Amazonian dark earth (ADE) soils, the increased amount of this material is believed to be due to anthropogenic action by ancient indigenous populations. In this study, we use 16S rRNA gene pyrosequencing to assess the bacterial diversity observed in the BC found in ADEs as well as in the dark earth itself and the adjacent Acrisol. Samples were taken from two sites, one cultivated with manioc and one with secondary forest cover. Analyses revealed that the community structure found in each sample had unique features. At a coarse phylogenetic resolution, the most abundant phyla in all sequence libraries were Actinobacteria, Acidobacteria, Verrucomicrobia and Proteobacteria that were present in similar relative abundance across all samples. However, the class composition varied between them highlighting the difference between the Acrisol and the remaining samples. This result was also corroborated by the comparison of the OTU composition (at 97 % identity). Also, soil coverage has shown an effect over the community structure observed in all samples. This pattern was found to be significant through unweighted UniFrac as well as P tests. These results indicate that, although the ADEs are found in patches within the Acrisols, the contrasting characteristics found between them led to the development of significantly different communities.
More Related Videos
Related Concept Videos
Methods to Assess Microbial Communities
Microbial Mats
Soil Microbial Ecology

