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Updated: May 10, 2026

Introductory Analysis and Validation of CUT&RUN Sequencing Data
Published on: December 13, 2024
TASUKE: a web-based visualization program for large-scale resequencing data
Masahiko Kumagai1, Jungsok Kim, Ryutaro Itoh
1Bioinformatics Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan.
Summary:
Because an enormous amount of sequence data is being collected, a method to effectively display sequence variation information is urgently needed. tasuke is a web application that visualizes large-scale resequencing data generated by next-generation sequencing technologies and is suitable for rapid data release to the public on the web. The variation and read depths of multiple genomes, as well as annotations, can be shown simultaneously at various scales. We demonstrate the use of TASUKE by applying it to 50 rice and 100 human genome resequencing datasets.
Availability And Implementation:
The tasuke program package and user manual are available from http://tasuke.dna.affrc.go.jp/.
Contact:
taitoh@affrc.go.jp.
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