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Updated: May 9, 2026

Purification of High Molecular Weight Genomic DNA from Powdery Mildew for Long-Read Sequencing
Published on: March 31, 2017
The wheat powdery mildew genome shows the unique evolution of an obligate biotroph
Thomas Wicker1, Simone Oberhaensli, Francis Parlange
1Institute of Plant Biology, University of Zurich, Zurich, Switzerland. wicker@botinst.uzh.ch
Abstract:
Wheat powdery mildew, Blumeria graminis forma specialis tritici, is a devastating fungal pathogen with a poorly understood evolutionary history. Here we report the draft genome sequence of wheat powdery mildew, the resequencing of three additional isolates from different geographic regions and comparative analyses with the barley powdery mildew genome. Our comparative genomic analyses identified 602 candidate effector genes, with many showing evidence of positive selection. We characterize patterns of genetic diversity and suggest that mildew genomes are mosaics of ancient haplogroups that existed before wheat domestication. The patterns of diversity in modern isolates suggest that there was no pronounced loss of genetic diversity upon formation of the new host bread wheat 10,000 years ago. We conclude that the ready adaptation of B. graminis f.sp. tritici to the new host species was based on a diverse haplotype pool that provided great genetic potential for pathogen variation.
Insights
Wheat powdery mildew (Blumeria graminis f.sp. tritici) adapted readily to new hosts due to its diverse genetic makeup. This study sequenced its genome, revealing ancient haplogroups and many candidate effector genes.
Area of Science:
- Genomics
- Evolutionary Biology
- Plant Pathology
Background:
- Wheat powdery mildew (Blumeria graminis f.sp. tritici) is a significant fungal pathogen.
- Its evolutionary history and adaptation mechanisms remain poorly understood.
Purpose of the Study:
- To investigate the evolutionary history and genetic diversity of wheat powdery mildew.
- To identify candidate effector genes and understand adaptation to wheat.
Main Methods:
- Draft genome sequencing of wheat powdery mildew.
- Resequencing of three additional isolates.
- Comparative genomics with barley powdery mildew.
Main Results:
- Identified 602 candidate effector genes, many under positive selection.
- Characterized genetic diversity, suggesting mosaic genomes from ancient haplogroups.
- Found no significant loss of genetic diversity upon wheat domestication.
Conclusions:
- Wheat powdery mildew's adaptation to new hosts is facilitated by a diverse genetic pool.
- Ancient haplogroups pre-dating wheat domestication contributed to pathogen variation.
- The pathogen possesses substantial genetic potential for adaptation and variation.
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