Transcriptional delay stabilizes bistable gene networks.
Chinmaya Gupta1, José Manuel López, William Ott
1Department of Mathematics, University of Houston, Houston, Texas 77004, USA.
Transcriptional delay significantly impacts gene networks. Increasing this delay in bistable systems enhances stability by increasing failed transitions between states, prolonging system residence times.
Area of Science:
- Systems biology
- Molecular systems biology
- Gene regulatory network dynamics
Background:
- Transcriptional delay is a critical factor influencing gene network dynamics.
- Bistable gene systems exhibit two stable states, crucial for cellular decision-making.
- Understanding the impact of delays on these systems is essential for predicting cellular behavior.
Purpose of the Study:
- To investigate the effect of transcriptional delay on the dynamics of stochastic bistable gene networks.
- To elucidate the mechanisms by which delay influences the stability and transitions within these systems.
- To develop a theoretical framework for analyzing delayed gene networks.
Main Methods:
- Stochastic modeling of bistable gene networks.
- Simulation of various network configurations with varying transcriptional delays.
- Development and analysis of a non-Markovian, analytically tractable reduced model.
Main Results:
- Increasing transcriptional delay dramatically increases mean residence times near stable states.
- The observed stabilization is attributed to an increased number of failed transitions between stable states.
- All simulated bistable systems exhibited this delay-induced stabilization effect.
Conclusions:
- Transcriptional delay acts as a significant stabilizing factor in bistable gene networks.
- Failed transitions are the key mechanism through which delay enhances system stability.
- The findings provide a fundamental understanding of how timing affects gene regulatory network behavior.
More Related Videos
10:44Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
Published on: December 7, 2021
12:54Real-time Analysis of Transcription Factor Binding, Transcription, Translation, and Turnover to Display Global Events During Cellular Activation
Published on: March 7, 2018
Related Concept Videos
Transcription Attenuation in Prokaryotes
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
Coordination of Gene Expression Processes in Bacteria
Transcriptional Regulation: Riboswitches
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability
Eukaryotic Transcription Inhibitors
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
