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Molecular characterization of echovirus 30-associated outbreak of aseptic meningitis in Guangdong in 2012
Hong Xiao, Dawei Guan, Ruiyu Chen
1Key Laboratory for Emergency Pathogen Detection, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou 511430, Guangdong, China. kecw2011@sina.com.
Background:
Evaluation of the primary etiologic agents that cause aseptic meningitis outbreaks may provide valuable information regarding the prevention and management of aseptic meningitis. An outbreak of aseptic meningitis occurred from May to June, 2012, in Guangdong Province, China. In order to determine the etiologic agent, CSF specimens from 121 children hospitalized for aseptic meningitis at Luoding People's Hospital of Guangdong Province were tested for virus isolation and identification.
Results:
Enterovirus RNA was positive in 62.0% of 121 CSF sspecimens by real-time polymerase chain reaction (RT-PCR). Amplification and sequencing of the VP1 region of enterovirus isolates revealed Echovirus 30 (E30) was the most common isolated serotype (80% of 40 enterovirus strains).For the molecular characterization of the E30 isolates, the VP1 gene sequence of 20 Luoding E30 isolates was compared pairwise using the MegAlign with reference strains from GenBank. The pairwise comparison of the nucleotide sequences of the VP1 genes demonstrated that the sequences of the strains differed from those of lineage groups C, D, E, F, and G. Reconstruction of the phylogenetic tree based on the VP1 nucleotide sequences resulted in a monophyletic tree, with seven clustered lineage groups. Most of the isolates were segregated from other lineage groups. Four E30 isolates causing this outbreak aggregated into the Lineage A cluster which was derived from E30 strains that circulated in other regions of China from 2003-2010.
Conclusions:
This study demonstrated the Luoding strains were a distinct lineage of E30, and a probable cause of this outbreak. The study also demonstrated that different E30 variants existed in the local meningitis outbreak.
Insights
Aseptic meningitis outbreaks in China were caused by a distinct lineage of Echovirus 30 (E30). This study identified E30 variants responsible for the 2012 Guangdong Province outbreak, aiding in prevention and management strategies.
Area of Science:
- Virology
- Epidemiology
- Molecular Biology
Background:
- Aseptic meningitis outbreaks necessitate identification of causative agents for effective prevention and management.
- An aseptic meningitis outbreak occurred in Guangdong Province, China, from May to June 2012.
- Cerebrospinal fluid (CSF) specimens from 121 hospitalized children were analyzed to determine the etiologic agent.
Purpose of the Study:
- To identify the primary etiologic agent responsible for an aseptic meningitis outbreak in Guangdong Province, China.
- To characterize the molecular features of the identified viral strains.
- To understand the genetic diversity and lineage of the causative agent.
Main Methods:
- Real-time polymerase chain reaction (RT-PCR) was used to detect enterovirus RNA in CSF specimens.
- Enterovirus isolates underwent amplification and sequencing of the VP1 gene region.
- Phylogenetic analysis and pairwise sequence comparison of VP1 genes were performed using MegAlign.
Main Results:
- Enterovirus RNA was detected in 62.0% of the CSF specimens.
- Echovirus 30 (E30) was the predominant serotype, accounting for 80% of identified enterovirus strains.
- Phylogenetic analysis revealed that the Luoding E30 isolates formed a distinct lineage (Lineage A), separate from previously identified groups, and were derived from strains circulating in China between 2003-2010.
Conclusions:
- The distinct E30 lineage identified in Luoding is a probable cause of the 2012 aseptic meningitis outbreak.
- The study highlights the existence of diverse Echovirus 30 variants contributing to local meningitis outbreaks.
- Findings provide crucial insights into the molecular epidemiology of enterovirus infections and outbreak dynamics.
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