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Laser Capture Microdissection of Highly Pure Trabecular Meshwork from Mouse Eyes for Gene Expression Analysis
Published on: June 3, 2018
Gene expression profile in human trabecular meshwork from patients with primary open-angle glaucoma
Yutao Liu1, R Rand Allingham, Xuejun Qin
1Center for Human Genetics, Duke University Medical Center, Durham, North Carolina.
Investigative Ophthalmology & Visual Science
|September 5, 2013
Summary
This study identified genes in human trabecular meshwork (TM) linked to primary open-angle glaucoma (POAG). Findings suggest endocytic and exosome pathways may play a role in POAG development.
Area of Science:
- Ophthalmology
- Genetics
- Molecular Biology
Background:
- Primary open-angle glaucoma (POAG) is a leading cause of irreversible blindness.
- The specific molecular mechanisms underlying POAG pathogenesis remain incompletely understood.
- Trabecular meshwork (TM) dysfunction is implicated in the elevated intraocular pressure characteristic of POAG.
Purpose of the Study:
- To identify novel genes and pathways in the human TM associated with POAG.
- To investigate TM gene expression profiles in POAG patients, including those with MYOC mutations.
- To compare gene expression between POAG and control TM tissues.
Main Methods:
- Human TM specimens were collected from POAG surgical cases and non-glaucomatous donor eyes.
- RNA was extracted and hybridized to gene expression arrays (Illumina HumanWG-6 BeadChips).
- Differential gene expression analysis and pathway enrichment analyses were performed using bioinformatics tools.
Main Results:
- Analysis of 15 POAG and 13 control TM specimens identified 483 differentially expressed genes.
- Thirty-six of these genes were associated with TM exosomes, highlighting their potential role.
- Enriched functional clusters included cell adhesion, extracellular matrix, and secretion pathways.
Conclusions:
- This study represents the largest TM gene expression analysis in POAG to date.
- It is the first to report TM expression in a POAG patient with a Q368X MYOC mutation.
- Results suggest that endocytic and exosome-mediated pathways are potentially involved in POAG pathogenesis.
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