Related Experiment Video
Updated: May 7, 2026

Describing a Transcription Factor Dependent Regulation of the MicroRNA Transcriptome
Published on: June 15, 2016
Cell-specific post-transcriptional regulation of γ-synuclein gene by micro-RNAs
Irina Surgucheva1, Sumedha Gunewardena, H Shanker Rao
1Retinal Biology Research Laboratory, Veterans Administration Medical Center, Kansas City, Missouri, United States of America ; Department of Neurology, Kansas University Medical Center, Kansas City, Kansas, United States of America.
Abstract:
γ-Synuclein is a member of the synucleins family of small proteins, which consists of three members:α, β- and γ-synuclein. γ-Synuclein is abnormally expressed in a high percentage of advanced and metastatic tumors, but not in normal or benign tissues. Furthermore, γ-synuclein expression is strongly correlated with disease progression, and can stimulate proliferation, induce invasion and metastasis of cancer cells. γ-Synuclein transcription is regulated basically through the binding of AP-1 to specific sequences in intron 1. Here we show that γ-synuclein expression may be also regulated by micro RNAs (miRs) on post-transcriptional level. According to prediction by several methods, the 3'-untranslated region (UTR) of γ-synuclein gene contains targets for miRs. Insertion of γ-synuclein 3'-UTR downstream of the reporter luciferase (LUC) gene causes a 51% reduction of LUC activity after transfection into SKBR3 and Y79 cells, confirming the presence of efficient targets for miRs in this fragment. Expression of miR-4437 and miR-4674 for which putative targets in 3'-UTR were predicted caused a 61.2% and 60.1% reduction of endogenous γ-synuclein expression confirming their role in gene expression regulation. On the other hand, in cells overexpressing γ-synuclein no significant effect of miRs on γ-synuclein expression was found suggesting that miRs exert their regulatory effect only at low or moderate, but not at high level of γ-synuclein expression. Elevated level of γ-synuclein differentially changes the level of several miRs expression, upregulating the level of some miRs and downregulating the level of others. Three miRs upregulated as a result of γ-synuclein overexpression, i.e., miR-885-3p, miR-138 and miR-497 have putative targets in 3'-UTR of the γ-synuclein gene. Some of miRs differentially regulated by γ-synuclein may modulate signaling pathways and cancer related gene expression. This study demonstrates that miRs might provide cell-specific regulation of γ-synuclein expression and set the stage to further evaluate their role in pathophysiological processes.
Insights
MicroRNAs (miRs) regulate gamma-synuclein (γ-synuclein) expression post-transcriptionally, impacting cancer progression. These miRs may offer cell-specific control over γ-synuclein levels in tumors.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- γ-Synuclein is upregulated in advanced and metastatic tumors, correlating with disease progression.
- γ-Synuclein promotes cancer cell proliferation, invasion, and metastasis.
- γ-Synuclein transcription is primarily regulated by AP-1 binding in intron 1.
Purpose of the Study:
- To investigate the post-transcriptional regulation of γ-synuclein by microRNAs (miRs).
- To identify specific miRs targeting the γ-synuclein 3'-untranslated region (UTR).
- To explore the interplay between γ-synuclein levels and miR expression in cancer cells.
Main Methods:
- Luciferase reporter assays to confirm miR targeting of γ-synuclein 3'-UTR.
- Transfection experiments to assess the effect of specific miRs (miR-4437, miR-4674) on endogenous γ-synuclein expression.
- Analysis of miR expression changes in cells with γ-synuclein overexpression.
Main Results:
- The γ-synuclein 3'-UTR contains functional miR target sites, reducing reporter gene activity by 51%.
- miR-4437 and miR-4674 significantly reduced endogenous γ-synuclein expression (61.2% and 60.1%, respectively).
- miRs regulate γ-synuclein primarily at low to moderate expression levels; high levels of γ-synuclein alter miR expression profiles.
Conclusions:
- MicroRNAs provide a crucial layer of post-transcriptional regulation for γ-synuclein.
- Specific miRs, like miR-4437 and miR-4674, can effectively suppress γ-synuclein expression.
- The interaction between γ-synuclein and miRs may influence cancer-related signaling pathways and warrants further investigation in pathophysiological contexts.
Related Concept Videos
Regulation of Expression at Multiple Steps
MicroRNAs
MicroRNAs
MicroRNAs
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
What is Gene Expression?

