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Updated: May 7, 2026

Site-specific Bacterial Chromosome Engineering: ΦC31 Integrase Mediated Cassette Exchange (IMCE)
Published on: March 16, 2012
The phage integrase vector pIPI03 allows RecA-independent, site-specific labelling of Staphylococcus lugdunensis
Simon Heilbronner1, Ian R Monk, Timothy J Foster
1Microbiology Department, Moyne Institute of Preventive Medicine, School of Genetics and Microbiology, Trinity College Dublin, Dublin 2, Ireland.
Abstract:
Staphylococcus lugdunensis is a coagulase negative staphylococcus that is a commensal of man and an opportunistic pathogen. A site-specific integrative plasmid for the use in S. lugdunensis was constructed and validated. The integrase gene ccrB of bacteriophage ϕSL01 together with its attachment site was cloned into the thermosensitive plasmid pIMAY. The resulting plasmid pIPI03 integrated RecA-independently, site-specifically and irreversibly into the S. lugdunensis chromosome. Two IPTG-inducible antibiotic resistance determinants were cloned into pIPI03 and the derivatives were used to construct strains suitable for competitive growth experiments in both in vitro and in vivo.
Insights
Researchers developed a novel integrative plasmid for Staphylococcus lugdunensis, enabling precise genetic modification. This tool facilitates the study of this opportunistic pathogen
Area of Science:
- Microbiology
- Bacteriology
- Molecular Biology
Background:
- Staphylococcus lugdunensis is a common human commensal and opportunistic pathogen.
- Genetic manipulation of S. lugdunensis is crucial for understanding its pathogenic mechanisms.
Purpose of the Study:
- To construct and validate a site-specific integrative plasmid for S. lugdunensis.
- To develop tools for studying S. lugdunensis in various experimental settings.
Main Methods:
- Cloning of bacteriophage ϕSL01 integrase gene (ccrB) and attachment site into a thermosensitive plasmid (pIMAY).
- Construction of the integrative plasmid pIPI03, demonstrating RecA-independent, site-specific chromosomal integration.
- Introduction of IPTG-inducible antibiotic resistance determinants into pIPI03.
Main Results:
- The plasmid pIPI03 achieved irreversible, site-specific integration into the S. lugdunensis chromosome.
- Engineered strains facilitated competitive growth experiments.
- The developed system allows for precise genetic manipulation and strain construction.
Conclusions:
- A functional site-specific integrative plasmid system for Staphylococcus lugdunensis has been established.
- This novel tool enhances the capability for genetic studies of S. lugdunensis.
- The system supports in vitro and in vivo competitive growth experiments.
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