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Published on: June 3, 2020
BBGRE: brain and body genetic resource exchange.
Joo Wook Ahn1, Abhishek Dixit, Caroline Johnston
1Department of Cytogenetics, Guy's and St Thomas NHS Foundation Trust, London, SE1 9RT, UK, MRC Social, Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, King's College London, De Crespigny Park, London, SE5 8AF and NIHR Biomedical Research Centre for Mental Health at South London and Maudsley NHS Foundation, London, SE5 8AF.
This study introduces the Brain and Body Genetic Resource Exchange (BBGRE), a new database for identifying copy number variants and associated phenotypes. This resource aids researchers in understanding genetic disorders and gene function.
Area of Science:
- Genetics
- Genomics
- Bioinformatics
Background:
- Copy number variations (genomic imbalances) are crucial for understanding genetic disorders.
- Array comparative genomic hybridization (array CGH) is a key diagnostic tool for detecting these variations.
- Interpreting the significance of copy number variants requires comparison across patient cohorts.
Purpose of the Study:
- To present a centralized resource for clinicians and researchers.
- To facilitate the identification of specific copy number variants and associated phenotypes.
- To promote research by enabling interactions between researchers and patients.
Main Methods:
- Development of the Brain and Body Genetic Resource Exchange (BBGRE) database.
- Inclusion of data from patients tested with array CGH at the SE Thames Regional Genetics Centre.
- Implementation of user-friendly searching with links to external resources.
Main Results:
- The BBGRE provides a searchable database of copy number variants and phenotypes.
- The resource links specific genetic variations to clinical presentations.
- Facilitates gene function elucidation through data correlation.
Conclusions:
- The BBGRE is a valuable tool for interpreting copy number variants in genetic disorders.
- Enhanced data sharing and collaboration can accelerate genetic research.
- The resource supports the clinical genetics community in diagnosing and understanding rare diseases.
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