Related Experiment Video
Updated: May 7, 2026

An Integrated Platform for Genome-wide Mapping of Chromatin States Using High-throughput ChIP-sequencing in Tumor Tissues
Published on: April 5, 2018
Mutations in regulators of the epigenome and their connections to global chromatin patterns in cancer
Christoph Plass1, Stefan M Pfister, Anders M Lindroth
1Division of Epigenomics and Cancer Risk Factors, German Cancer Research Center (DKFZ).
Abstract:
Malignancies are characterized by extensive global reprogramming of epigenetic patterns, including gains or losses in DNA methylation and changes to histone marks. Furthermore, high-resolution genome-sequencing efforts have discovered a wealth of mutations in genes encoding epigenetic regulators that have roles as 'writers', 'readers' or 'editors' of DNA methylation and/or chromatin states. In this Review, we discuss how these mutations have the potential to deregulate hundreds of targeted genes genome wide. Elucidating these networks of epigenetic factors will provide mechanistic understanding of the interplay between genetic and epigenetic alterations, and will inform novel therapeutic strategies.
Insights
Cancer involves widespread epigenetic changes, including DNA methylation and histone modifications. Mutations in epigenetic regulators can disrupt gene expression, offering new therapeutic targets.
Area of Science:
- Oncology
- Epigenetics
- Genomics
Background:
- Malignancies exhibit global epigenetic reprogramming, affecting DNA methylation and histone marks.
- Mutations in genes encoding epigenetic regulators (writers, readers, editors) are frequently observed in cancers.
Purpose of the Study:
- To review how mutations in epigenetic regulators contribute to cancer development.
- To explore the deregulation of genes by these mutations.
- To highlight the potential for novel therapeutic strategies.
Main Methods:
- Review of existing literature on cancer epigenetics and genomics.
- Analysis of high-resolution genome-sequencing data for mutations in epigenetic genes.
- Discussion of the functional impact of these mutations on gene regulation.
Main Results:
- Mutations in epigenetic regulators can lead to widespread, genome-wide deregulation of hundreds of target genes.
- These genetic alterations profoundly impact epigenetic patterns in cancer cells.
Conclusions:
- Understanding the networks of epigenetic factors is crucial for deciphering the interplay between genetic and epigenetic alterations in cancer.
- Elucidation of these mechanisms will pave the way for developing novel epigenetic therapies for malignancies.
More Related Videos
Related Concept Videos
Epigenetic Regulation
X-chromosome...
Epigenetic Regulation
Epigenetic Regulation
Spreading of Chromatin Modifications
Writers
The writer...
Master Transcription Regulators
Chromatin Position Affects Gene Expression
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...

