Polymyxins and analogues bind to ribosomal RNA and interfere with eukaryotic translation in vitro

Lisa S McCoy1, Kade D Roberts, Roger L Nation

  • 1Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093 (USA) http://torgroup.ucsd.edu/

Insights

Polymyxin antibiotics, known for killing bacteria by disrupting membranes, also bind to translation machinery in both prokaryotes and eukaryotes. This interaction may explain some of the severe side effects associated with these drugs.

Area of Science:

  • Microbiology
  • Molecular Biology
  • Pharmacology

Background:

  • Polymyxins are critical antibiotics for treating infections caused by Gram-negative bacteria.
  • Their primary mechanism of action is understood to involve disruption of bacterial membrane integrity.
  • However, the full spectrum of polymyxin interactions and their clinical implications remain incompletely understood.

Purpose of the Study:

  • To investigate novel molecular targets of polymyxins beyond membrane disruption.
  • To explore the potential impact of polymyxins on host cell translational processes.
  • To identify mechanisms contributing to polymyxin-associated toxicity.

Main Methods:

  • In vitro binding assays to identify antibiotic targets.
  • Analysis of interactions with ribosomal A-sites in prokaryotic and eukaryotic systems.
  • In vitro translation assays to assess functional effects on protein synthesis.

Main Results:

  • Polymyxins, including Polymyxin B and colistin, were found to bind to the A-site of ribosomes in both prokaryotic and eukaryotic cells.
  • These antibiotics inhibited eukaryotic translation in vitro.
  • The binding to translational machinery represents a newly identified molecular interaction for polymyxins.

Conclusions:

  • Polymyxin antibiotics interact with the A-site of ribosomes, a key component of translational decoding.
  • This interaction with eukaryotic translation machinery may contribute to the adverse effects observed clinically.
  • These findings suggest new avenues for understanding polymyxin pharmacology and toxicity.

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