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Updated: May 7, 2026

Transmembrane Domain Oligomerization Propensity determined by ToxR Assay
Published on: May 26, 2011
Structural insights into the oligomerization mode of the human receptor for advanced glycation end-products
Laure Yatime1, Gregers R Andersen
1Department of Molecular Biology and Genetics, Aarhus University, Denmark.
Abstract:
The receptor for advanced glycation end-products (RAGE) is a pattern recognition receptor sensing endogenous stress signals associated with the development of various diseases, including diabetes, vascular complications, Alzheimer's disease and cancer. RAGE ligands include advanced glycation end-products, S100 proteins, high mobility group box 1 protein and amyloid β-peptides/fibrils. Their signalling through RAGE induces a sustained inflammation that accentuates tissue damage, thereby participating in disease progression. Receptor oligomerization appears to be a crucial parameter for the formation of active signalling complexes, although the precise mode of oligomerization remains unclear in the context of these various ligands. In the present study, we report the first crystal structure of the VC1C2 fragment of the RAGE ectodomain. This structure provides the first description of the C2 domain in the context of the entire ectodomain and supports the observation of its conformational freedom relative to the rigid VC1 domain tandem. In addition, we have obtained a new crystal structure of the RAGE VC1 fragment. The packing in both crystal structures reveals an association of the RAGE molecules through contacts between two V domains and the physiological relevance of this homodimerization mode is discussed. Based on homology with single-pass transmembrane receptors, we also suggest RAGE dimerization through a conserved GxxxG motif within its transmembrane domain. A multimodal homodimerization strategy of RAGE is proposed to form the structural basis for ligand-specific complex formation and signalling functions, as well as for RAGE-mediated cell adhesion.
Structured Digital Abstract:
hRAGE_VC1C2 and hRAGE_VC1C2 bind by x-ray crystallography (View interaction) hRAGE_VC1 and hRAGE_VC1 bind by x-ray crystallography (View interaction).
Insights
The receptor for advanced glycation end-products (RAGE) undergoes homodimerization, crucial for its signaling in diseases like Alzheimer's and cancer. This study reveals RAGE
Area of Science:
- Structural biology
- Molecular and cellular biology
- Biochemistry
Background:
- The receptor for advanced glycation end-products (RAGE) is a pattern recognition receptor implicated in various diseases, including diabetes, vascular complications, Alzheimer's disease, and cancer.
- RAGE signaling is triggered by diverse ligands and involves receptor oligomerization, which is critical for forming active signaling complexes.
- The precise mode of RAGE oligomerization in response to different ligands remains unclear.
Purpose of the Study:
- To elucidate the structural basis of RAGE oligomerization and its role in ligand binding and signaling.
- To provide the first crystal structure of the VC1C2 fragment of the RAGE ectodomain.
- To investigate potential dimerization modes of RAGE, including ectodomain association and transmembrane domain interactions.
Main Methods:
- X-ray crystallography was employed to determine the structures of the RAGE VC1C2 and VC1 fragments.
- Analysis of crystal packing to identify intermolecular contacts and potential oligomerization interfaces.
- Homology modeling based on known transmembrane receptors to infer dimerization mechanisms.
Main Results:
- The crystal structure of the RAGE VC1C2 fragment reveals the C2 domain's conformational flexibility relative to the VC1 tandem.
- Crystal packing analysis indicates RAGE homodimerization through V domain contacts in the ectodomain.
- A conserved GxxxG motif in the transmembrane domain suggests a potential dimerization interface.
Conclusions:
- RAGE exhibits a multimodal homodimerization strategy involving both ectodomain and transmembrane domain interactions.
- This proposed dimerization mechanism provides a structural basis for ligand-specific complex formation and RAGE-mediated signaling.
- RAGE homodimerization is critical for its role in disease progression and cell adhesion.
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