Related Experiment Video
Updated: May 6, 2026

Probing the Structure and Dynamics of Interfacial Water with Scanning Tunneling Microscopy and Spectroscopy
Published on: May 27, 2018
Probing water micro-solvation in proteins by water catalysed proton-transfer tautomerism
Jiun-Yi Shen1, Wei-Chih Chao, Chun Liu
11] Department of Chemistry, Center for Emerging Material and Advanced Devices, National Taiwan University, Taipei 10617, Taiwan [2].
Abstract:
Scientists have made tremendous efforts to gain understanding of the water molecules in proteins via indirect measurements such as molecular dynamic simulation and/or probing the polarity of the local environment. Here we present a tryptophan analogue that exhibits remarkable water catalysed proton-transfer properties. The resulting multiple emissions provide unique fingerprints that can be exploited for direct sensing of a site-specific water environment in a protein without disrupting its native structure. Replacing tryptophan with the newly developed tryptophan analogue we sense different water environments surrounding the five tryptophans in human thromboxane A₂ synthase. This development may lead to future research to probe how water molecules affect the folding, structures and activities of proteins.

