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Updated: May 6, 2026

Site Directed Spin Labeling and EPR Spectroscopic Studies of Pentameric Ligand-Gated Ion Channels
Published on: July 4, 2016
Proton-mediated conformational changes in an acid-sensing ion channel
Swarna S Ramaswamy1, David M MacLean, Alemayehu A Gorfe
1From the Center for Membrane Biology, Department of Biochemistry and Molecular Biology, and.
Proton binding causes conformational changes in acid-sensing ion channels, crucial for their function. Specific mutations disrupt these changes, highlighting the role of key amino acids in proton-induced channel activation.
Area of Science:
- Molecular biology
- Neuroscience
- Biophysics
Background:
- Acid-sensing ion channels (ASICs) are proton-gated ion channels.
- ASICs are involved in pain perception, neuronal signaling, and stroke pathology.
- Understanding ASIC gating mechanisms is vital for therapeutic development.
Purpose of the Study:
- To investigate the conformational changes in ASICs upon proton binding.
- To identify the specific amino acid residues critical for proton sensing and channel activation.
Main Methods:
- Luminescence resonance energy transfer (LRET) to detect conformational changes.
- Site-directed mutagenesis to alter specific amino acid residues (Asp-238, Glu-239, Asp-260).
- Electrophysiology to assess channel function and proton sensitivity (EC50).
Main Results:
- Proton binding induces a conformational change in the extracellular domain of ASICs, increasing LRET efficiency.
- Mutating key acidic residues (Asp-238, Glu-239, Asp-260) abolished or significantly altered proton-induced conformational changes.
- Mutations progressively reduced proton sensitivity, with a triple mutant showing no response despite surface expression.
Conclusions:
- Specific carboxylate residues in the finger domain are essential for proton detection.
- Proton-induced conformational changes in the extracellular domain are critical for ASIC activation.
- These findings elucidate the molecular mechanism of ASIC gating and proton sensing.
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