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Updated: May 6, 2026

DNA-based Fish Species Identification Protocol
Published on: April 28, 2010
A rapid low-cost high-density DNA-based multi-detection test for routine inspection of meat species
Chun Chi Lin1, Lai Ling Fung, Po Kwok Chan
1Department of Biology and Chemistry, City University of Hong Kong, Kowloon Tong, Hong Kong, China.
Abstract:
The increasing occurrence of food frauds suggests that species identification should be part of food authentication. Current molecular-based species identification methods have their own limitations or drawbacks, such as relatively time-consuming experimental steps, expensive equipment and, in particular, these methods cannot identify mixed species in a single experiment. This project proposes an improved method involving PCR amplification of the COI gene and detection of species-specific sequences by hybridisation. Major innovative breakthrough lies in the detection of multiple species, including pork, beef, lamb, horse, cat, dog and mouse, from a mixed sample within a single experiment. The probes used are species-specific either in sole or mixed species samples. As little as 5 pg of DNA template in the PCR is detectable in the proposed method. By designing species-specific probes and adopting reverse dot blot hybridisation and flow-through hybridisation, a low-cost high-density DNA-based multi-detection test suitable for routine inspection of meat species was developed.

