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Updated: May 6, 2026

Time-resolved ElectroSpray Ionization Hydrogen-deuterium Exchange Mass Spectrometry for Studying Protein Structure and Dynamics
Published on: April 17, 2017
Gas phase hydrogen / deuterium exchange in electrospray ionization mass spectrometry as a practical tool for
M E Hemling1, J J Conboy, M F Bean
1Physical and Structural Chemistry, SmithKline Beecham Pharmaceuticals, P.O. Box 1539, 19406-0939, King of Prussia, PA, USA.
Abstract:
Two methods for gas phase hydrogen/deuterium exchange have been developed for the analysis of small molecules. Hydrogen/deuterium exchange has been implemented by making simple modifications to the plumbing for the nebulizer and curtain gases on a nebulization-assisted electrospray ion source. The nebulizer gas exchange method has demonstrated deuterium exchange levels of 84-97% for a variety of molecules representing a wide range of structural classes containing up to 51 potentially exchangeable hydrogens; this allowed determination of the number of exchangeable hydrogens for all of the molecules studied containing ≤ 25 labile hydrogens (M r ≤ 3000). ND3 gas consumption is minimized in the nebulizer method by toggling the nebulizer from air to ND3 for only a few scans of the total sample elution period. The curtain gas exchange method is more variable, yielding exchange levels of 32-98% for the same set of molecules; this was still sufficient to allow determination of > 70% of the molecules studied containing ≤ 25 labile hydrogens. Gas consumption is minimized in the curtain method by replacing ≤ 10% of the curtain gas flow with ND3. Neither the nebulizer nor curtain exchange method requires the use of deuterated or aprotic solvents at typical 2 μL/min flow rates.
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