Intrinsic features in microRNA transcriptomes link porcine visceral rather than subcutaneous adipose tissues to

Jideng Ma1, Zhi Jiang, Shen He

  • 1Institute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Ya'an, Sichuan, China.

Plos One
|November 14, 2013
PubMed

Insights

This study reveals distinct microRNA (miRNA) profiles in visceral adipose tissues (VATs) versus subcutaneous adipose tissues (SATs). VAT-specific miRNAs are linked to immune and inflammation responses, suggesting a role in metabolic disorder risk.

Area of Science:

  • Molecular Biology
  • Genomics
  • Metabolomics

Background:

  • MicroRNAs (miRNAs) are key post-transcriptional regulators of gene expression.
  • Visceral adipose tissues (VATs) and subcutaneous adipose tissues (SATs) exhibit distinct characteristics.
  • Limited research exists on miRNA transcriptome differences between VATs and SATs.

Purpose of the Study:

  • To comprehensively investigate and compare miRNA transcriptomes between porcine VATs and SATs.
  • To identify differentially expressed miRNAs and their potential roles in adipose tissue function and metabolic risk.

Main Methods:

  • Small RNA sequencing was employed across six porcine adipose tissue variants.
  • miRNA identification, quantification, and comparative analysis were performed.
  • miRNA target prediction was utilized to infer functional associations.

Main Results:

  • 219 known miRNAs, 97 novel miRNA*s, and 124 conserved miRNAs were identified.
  • Universally abundant miRNAs (e.g., miR-148a-3p, miR-143-3p) suggest housekeeping roles in adipogenesis.
  • Significant miRNA expression variations were observed between VATs and SATs, with VATs enriched in immune/inflammation-related miRNAs.

Conclusions:

  • Distinct miRNA expression patterns exist between VATs and SATs, reflecting their intrinsic differences.
  • VAT-specific miRNAs are predominantly associated with immune and inflammation responses.
  • These findings suggest VATs may be closely linked to an increased risk of metabolic disorders.

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