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Updated: May 5, 2026

Fractionation for Resolution of Soluble and Insoluble Huntingtin Species
Published on: February 27, 2018
Aberrantly spliced HTT, a new player in Huntington's disease pathogenesis
Theresa A Gipson1, Andreas Neueder2, Nancy S Wexler3
1Koch Institute for Integrative Cancer Research; Massachusetts Institute of Technology; Cambridge, MA USA.
Insights
Huntington's disease (HD) pathogenesis may involve mis-splicing of the huntingtin gene (HTT), producing a pathogenic exon 1 protein fragment. This novel mechanism offers new therapeutic targets for HD.
Area of Science:
- Neurodegenerative diseases
- Molecular genetics
- RNA splicing
Background:
- Huntington's disease (HD) is a fatal neurodegenerative disorder linked to expanded CAG repeats in the huntingtin gene (HTT).
- Mutant HTT protein fragments are implicated in HD pathogenesis, but the origin of small N-terminal fragments remained unclear.
- Previous research identified cleavage sites, suggesting proteolysis as the source of fragments.
Purpose of the Study:
- To investigate the hypothesis that mis-splicing, not proteolysis, generates the smallest N-terminal huntingtin fragment in HD.
- To elucidate a novel molecular mechanism contributing to Huntington's disease pathogenesis.
Main Methods:
- Analysis of huntingtin fragments in a mouse model.
- Demonstration of HTT intron 1 mis-splicing.
- Identification of a short, polyadenylated mRNA transcript.
- Translation of the transcript into an exon 1 protein.
Main Results:
- Mis-splicing of mutant huntingtin intron 1 was confirmed.
- This mis-splicing produces a pathogenic exon 1 protein fragment.
- Transgenic mice with human huntingtin exon 1 exhibit rapid HD-like symptoms.
- A novel mechanism involving mis-spliced HTT transcripts and exon 1 protein production in HD was identified.
Conclusions:
- Mis-splicing of HTT intron 1 is a key mechanism generating pathogenic exon 1 protein in Huntington's disease.
- This finding provides new insights into HD molecular pathogenesis.
- The identified mechanism has significant implications for developing novel therapeutic strategies for HD.
Abstract:
Huntington's disease (HD) is an adult-onset neurodegenerative disorder caused by a mutated CAG repeat in the huntingtin gene that is translated into an expanded polyglutamine tract. The clinical manifestation of HD is a progressive physical, cognitive, and psychiatric deterioration that is eventually fatal. The mutant huntingtin protein is processed into several smaller fragments, which have been implicated as critical factors in HD pathogenesis. The search for proteases responsible for their production has led to the identification of several cleavage sites on the huntingtin protein. However, the origin of the small N-terminal fragments that are found in HD postmortem brains has remained elusive. Recent mapping of huntingtin fragments in a mouse model demonstrated that the smallest N-terminal fragment is an exon 1 protein. This discovery spurred our hypothesis that mis-splicing as opposed to proteolysis could be generating the smallest huntingtin fragment. We demonstrated that mis-splicing of mutant huntingtin intron 1 does indeed occur and results in a short polyadenylated mRNA, which is translated into an exon 1 protein. The exon 1 protein fragment is highly pathogenic. Transgenic mouse models containing just human huntingtin exon 1 develop a rapid onset of HD-like symptoms. Our finding that a small, mis-spliced HTT transcript and corresponding exon 1 protein are produced in the context of an expanded CAG repeat has unraveled a new molecular mechanism in HD pathogenesis. Here we present detailed models of how mis-splicing could be facilitated, what challenges remain in this model, and implications for therapeutic studies.
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