Related Experiment Video
Updated: Aug 12, 2026

Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
Functional substructure of antigen molecules
It has been firmly established that helper T lymphocytes respond to antigen only when it is presented in the context of class II major histocompatibility complex molecules. This has fostered the concept that the nominal antigen becomes physically associated with class II molecules on antigen-presenting cells (APCs). However, the structural components of antigen molecules that actually interact with class II molecules on APCs (agretopes) and with antigen receptors of T lymphocytes (epitopes) have not been precisely defined. This question was addressed using murine T cell clones specific for the model synthetic antigen L-tyrosine-p-azobenzenearsonate (ABA-tyr), which induces T cell responses despite its small size and simple structure, and a series of analogues of the homologous immunogen. Two experimental approaches were taken. First, APCs were pulsed with analogues and used to stimulate T cell proliferation. The patterns of stimulation segregated the clones into two specificity groups and indicated that the epitope recognized by the T cell included the arsonate group and elements of the side chain of tyrosine. Second, analogues that failed to stimulate were used to block the presentation of ABA-tyr in an effort to define the agretope. The blocking protocol involved serially pulsing APCs with analogue and with ABA-tyr prior to culturing with T cells. Compounds containing the core azo-linked ring structure blocked presentation of ABA-tyr in a dose-dependent fashion, whereas p-arsanilic acid and L-tyrosine were ineffective. The blocking was specific inasmuch as the compounds had no effect on the antigen-induced proliferative responses of unrelated T cell clones.(ABSTRACT TRUNCATED AT 250 WORDS)
It has been firmly established that helper T lymphocytes respond to antigen only when it is presented in the context of class II major histocompatibility complex molecules. This has fostered the concept that the nominal antigen becomes physically associated with class II molecules on antigen-presenting cells (APCs). However, the structural components of antigen molecules that actually interact with class II molecules on APCs (agretopes) and with antigen receptors of T lymphocytes (epitopes) have not been precisely defined. This question was addressed using murine T cell clones specific for the model synthetic antigen L-tyrosine-p-azobenzenearsonate (ABA-tyr), which induces T cell responses despite its small size and simple structure, and a series of analogues of the homologous immunogen. Two experimental approaches were taken. First, APCs were pulsed with analogues and used to stimulate T cell proliferation. The patterns of stimulation segregated the clones into two specificity groups and indicated that the epitope recognized by the T cell included the arsonate group and elements of the side chain of tyrosine. Second, analogues that failed to stimulate were used to block the presentation of ABA-tyr in an effort to define the agretope. The blocking protocol involved serially pulsing APCs with analogue and with ABA-tyr prior to culturing with T cells. Compounds containing the core azo-linked ring structure blocked presentation of ABA-tyr in a dose-dependent fashion, whereas p-arsanilic acid and L-tyrosine were ineffective. The blocking was specific inasmuch as the compounds had no effect on the antigen-induced proliferative responses of unrelated T cell clones.(ABSTRACT TRUNCATED AT 250 WORDS)
Related Concept Videos
Antibody Structure
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
Antibody Structure
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
Antigens Involved in Adaptive Immunity
Complete Antigens
Complete antigens possess both immunogenicity and reactivity.
Diversity of Antigen Receptors
Before encountering any antigen, lymphocytes express these receptors. On B cells, the antigen receptor is a membrane-bound antibody molecule called BCR; on T cells, it is a T cell receptor or TCR. B and T cell receptors are composed of two...
Antigen Processing Pathways
MHC Class I: Presenting Endogenous...
Antibody Structure and Classes
The basic structure of an antibody consists of four protein chains: two identical heavy chains and two identical light chains. These chains are held together by disulfide bonds and other non-covalent interactions, forming a Y-shaped structure.

