The structure of Rap1 in complex with RIAM reveals specificity determinants and recruitment mechanism
Hao Zhang1, Yu-Chung Chang, Mark L Brennan
1Developmental Therapeutics Program, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA.
Abstract:
The small GTPase Rap1 induces integrin activation via an inside-out signaling pathway mediated by the Rap1-interacting adaptor molecule (RIAM). Blocking this pathway may suppress tumor metastasis and other diseases that are related to hyperactive integrins. However, the molecular basis for the specific recognition of RIAM by Rap1 remains largely unknown. Herein we present the crystal structure of an active, GTP-bound GTPase domain of Rap1 in complex with the Ras association (RA)-pleckstrin homology (PH) structural module of RIAM at 1.65 Å. The structure reveals that the recognition of RIAM by Rap1 is governed by side-chain interactions. Several side chains are critical in determining specificity of this recognition, particularly the Lys31 residue in Rap1 that is oppositely charged compared with the Glu31/Asp31 residue in other Ras GTPases. Lys31 forms a salt bridge with RIAM residue Glu212, making it the key specificity determinant of the interaction. We also show that disruption of these interactions results in reduction of Rap1:RIAM association, leading to a loss of co-clustering and cell adhesion. Our findings elucidate the molecular mechanism by which RIAM mediates Rap1-induced integrin activation. The crystal structure also offers new insight into the structural basis for the specific recruitment of RA-PH module-containing effector proteins by their small GTPase partners.
Insights
Researchers elucidated how Rap1 GTPase specifically binds to RIAM, a key molecule in cell adhesion and tumor metastasis. This discovery reveals critical interactions, offering potential therapeutic targets for diseases involving hyperactive integrins.
Area of Science:
- Molecular Biology
- Structural Biology
- Cell Biology
Background:
- The small GTPase Rap1 activates integrins through the Rap1-interacting adaptor molecule (RIAM).
- Understanding Rap1-RIAM interaction is crucial for targeting diseases linked to hyperactive integrins, such as tumor metastasis.
- The precise molecular recognition mechanism between Rap1 and RIAM is not well understood.
Purpose of the Study:
- To determine the crystal structure of the Rap1 GTPase domain bound to the RIAM RA-PH module.
- To elucidate the molecular basis for the specific recognition and interaction between Rap1 and RIAM.
- To understand how this interaction mediates Rap1-induced integrin activation.
Main Methods:
- X-ray crystallography to obtain the 1.65 Å crystal structure of Rap1-GTP bound to the RIAM RA-PH module.
- Biochemical assays to investigate the role of specific amino acid residues in Rap1-RIAM binding.
- Cell-based assays to assess the functional consequences of disrupting the Rap1-RIAM interaction on cell adhesion and co-clustering.
Main Results:
- The crystal structure reveals that Rap1 specifically recognizes RIAM through side-chain interactions.
- Rap1 residue Lys31, unique among related GTPases, forms a critical salt bridge with RIAM residue Glu212, serving as the key specificity determinant.
- Disruption of these identified interactions significantly reduces Rap1:RIAM association, co-clustering, and cell adhesion.
Conclusions:
- The study elucidates the molecular mechanism of Rap1:RIAM interaction, highlighting Lys31 as the crucial specificity determinant.
- This detailed structural insight explains how RIAM mediates Rap1-induced integrin activation.
- The findings provide a structural basis for understanding the specific recruitment of effector proteins containing RA-PH modules by small GTPases.
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