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Updated: May 5, 2026

Detection and Genogrouping of Noroviruses from Children's Stools By Taqman One-step RT-PCR
Published on: July 22, 2012
Multiple norovirus infections in a birth cohort in a Peruvian Periurban community
Mayuko Saito1, Sonia Goel-Apaza, Susan Espetia
1Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Peru.
Insights
Human norovirus infections are common in infants, causing diarrhea and impacting growth. Serial infections with multiple genotypes suggest a need for multi-genotype vaccines to reduce childhood illness.
Area of Science:
- Pediatric Infectious Diseases
- Gastroenterology
- Public Health Epidemiology
Background:
- Human noroviruses are a leading cause of infant diarrhea globally, particularly in developing nations.
- Community-level impact data for norovirus infections remain limited.
- Infant diarrhea significantly contributes to childhood morbidity in resource-limited settings.
Purpose of the Study:
- To estimate the incidence of norovirus infection and associated diarrhea in a Peruvian birth cohort.
- To characterize norovirus genogroups, genotypes, and excretion duration in young children.
- To assess the impact of norovirus infection on child growth and development.
Main Methods:
- A birth cohort study followed children to assess norovirus infection and diarrhea incidence.
- Polymerase chain reaction (PCR) was used to detect norovirus genogroup and genotype in stool samples.
- Excretion duration and rotavirus coinfection were analyzed in a subset of episodes.
Main Results:
- By age two, 71% of children experienced norovirus-associated diarrhea, with Genogroup II (GII) infections being most frequent.
- Eighteen genotypes were identified, with GII genotype 4 being the most prevalent (41%).
- Norovirus infection was associated with lower length-for-age z scores at 12 and 24 months.
Conclusions:
- Norovirus infections are acquired early in life, with children experiencing repeated infections by different genotypes.
- Findings suggest genotype-specific immunity, indicating a need for multi-genotype vaccines.
- Vaccination strategies targeting multiple norovirus genotypes could significantly reduce childhood morbidity.
Background:
Human noroviruses are among the most common enteropathogens globally, and are a leading cause of infant diarrhea in developing countries. However, data measuring the impact of norovirus at the community level are sparse.
Methods:
We followed a birth cohort of children to estimate norovirus infection and diarrhea incidence in a Peruvian community. Stool samples from diarrheal episodes and randomly selected nondiarrheal samples were tested by polymerase chain reaction for norovirus genogroup and genotype. Excretion duration and rotavirus coinfection were evaluated in a subset of episodes.
Results:
Two hundred twenty and 189 children were followed to 1 and 2 years of age, respectively. By 1 year, 80% (95% confidence interval [CI], 75%-85%) experienced at least 1 norovirus infection and by 2 years, 71% (95% CI, 65%-77%) had at least 1 episode of norovirus-associated diarrhea. Genogroup II (GII) infections were 3 times more frequent than genogroup 1 (GI) infections. Eighteen genotypes were found; GII genotype 4 accounted for 41%. Median excretion duration was 34.5 days for GII vs 8.5 days for GI infection (P = .0006). Repeat infections by the same genogroup were common, but repeat infections by the same genotype were rare. Mean length-for-age z score at 12 months was lower among children with prior norovirus infection compared to uninfected children (coefficient: -0.33 [95% CI, -.65 to -.01]; P = .04); the effect persisted at 24 months.
Conclusions:
Norovirus infection occurs early in life and children experience serial infections with multiple genotypes, suggesting genotype-specific immunity. An effective vaccine would have a substantial impact on morbidity, but may need to target multiple genotypes.
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