Related Experiment Video
Updated: May 5, 2026

An Optimized Rhizobox Protocol to Visualize Root Growth and Responsiveness to Localized Nutrients
Published on: October 22, 2018
Genetic networks involved in poplar root response to low nitrogen
Hairong Wei1, Yordan Yordanov2, Sapna Kumari3
1School of Forest Resources and Environmental Science; Michigan Technological University; Houghton, MI USA; Biotechnology Research Center; Michigan Technological University; Houghton, MI USA; Department of Mathematics; Michigan Technological University; Houghton, MI USA.
Abstract:
Perception of environmental cues and adaptation to changing environmental conditions are crucial for survival of sessile organisms like plants. This is even more important for woody perennial species like trees that can occupy a site for thousands of years. We have previously shown that under low nitrogen (LN), poplar trees display a vigorous and long-lasting root growth associated with global transcriptomic reprogramming and an activation of hierarchical genetic networks. Here we use computational analysis to better understand the network among the genes showing distinct chronological patterns of expression during the response. Our analyses confirm the previous findings, define new potential signaling pathways and the possible downstream targets of these signaling events.
Related Concept Videos
Key Elements for Plant Nutrition
Inorganic Nitrogen Assimilation
Stringent Response in E. coli
Cell Signaling in Plants
Global Regulatory Systems
Overview of Metabolism
Plant Metabolism
Sunlight, the primary source of energy in plants, is first absorbed by the chlorophyll pigments present in their leaves. Plants then use this energy to carry out photosynthesis, where water is oxidized into oxygen and carbon dioxide...

