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HPLC-based Assay to Monitor Extracellular Nucleotide/Nucleoside Metabolism in Human Chronic Lymphocytic Leukemia Cells
Published on: July 20, 2016
Poly(ADP-ribose) polymerase inhibitor CEP-8983 synergizes with bendamustine in chronic lymphocytic leukemia cells in
Robert L Dilley1, Weijie Poh1, Douglas E Gladstone1
1Department of Oncology and the Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD 21287, USA.
Abstract:
DNA repair aberrations and associated chromosomal instability is a feature of chronic lymphocytic leukemia (CLL). To evaluate if DNA repair insufficiencies are related to methylation changes, we examined the methylation of nine promoter regions of DNA repair proteins by bisulfide sequencing in 26 CLL primary samples and performed quantitative PCR on a subset of samples to examine BRCA1 expression. We also investigated if changes in cytogenetic or expression level of DNA repair proteins led to changes in sensitivity to a novel PARP inhibitor, CEP-8983, alone and in combination with bendamustine. No changes in promoter methylation were identified in BRCA1, BRCA2, FANC-C, FANC-F, FANC-L, ATM, MGMT, hMLH1 and H2AX except for two cases of minor BRCA1 hypermethylation. CLL samples appeared to have reduced BRCA1 mRNA expression uniformly in comparison to non-malignant lymphocytes irrespective of promoter hypermethylation. CEP-8983 displayed single agent cytotoxicity and the combination with bendamustine demonstrated synergistic cytotoxicity in the majority of CLL samples. These results were consistent across cytogenetic subgroups, including 17p deleted and previously treated patients. Our results provide rationale for further exploration of the combination of a PARP inhibitor and DNA damaging agents as a novel therapeutic strategy in CLL.
Insights
Chronic lymphocytic leukemia (CLL) shows DNA repair issues. A PARP inhibitor combined with bendamustine demonstrated synergistic cytotoxicity in most CLL samples, suggesting a new therapeutic strategy.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Chronic lymphocytic leukemia (CLL) is characterized by DNA repair aberrations and chromosomal instability.
- The relationship between DNA repair deficiencies and epigenetic modifications, specifically promoter methylation, in CLL requires further investigation.
Purpose of the Study:
- To investigate the methylation status of nine DNA repair protein promoter regions in CLL.
- To assess BRCA1 mRNA expression in CLL samples.
- To evaluate the sensitivity of CLL cells to a novel PARP inhibitor, CEP-8983, alone and in combination with bendamustine, in relation to DNA repair protein alterations.
Main Methods:
- Bisulfite sequencing was employed to examine the methylation of nine DNA repair protein promoter regions in 26 primary CLL samples.
- Quantitative PCR was performed on a subset of samples to determine BRCA1 mRNA expression levels.
- Cytotoxicity assays were conducted to assess the efficacy of CEP-8983 and its combination with bendamustine against CLL cells.
Main Results:
- No significant promoter hypermethylation was observed for most DNA repair genes, with only minor BRCA1 hypermethylation in two cases.
- CLL samples consistently exhibited reduced BRCA1 mRNA expression compared to non-malignant lymphocytes, independent of promoter methylation status.
- CEP-8983 showed single-agent cytotoxicity, and its combination with bendamustine exhibited synergistic cytotoxicity across most CLL samples, including those with 17p deletion and previously treated patients.
Conclusions:
- Reduced BRCA1 mRNA expression in CLL is a uniform finding, not directly linked to promoter hypermethylation.
- The combination of a PARP inhibitor and bendamustine demonstrates significant synergistic cytotoxicity in CLL, supporting its potential as a novel therapeutic strategy.
- This combination therapy warrants further clinical exploration for treating chronic lymphocytic leukemia, including high-risk subgroups.
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