Related Experiment Video
Updated: May 3, 2026

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Targeting cyclin-dependent kinase 1 (CDK1) but not CDK4/6 or CDK2 is selectively lethal to MYC-dependent human breast
Jian Kang, C Marcelo Sergio, Robert L Sutherland
1The Kinghorn Cancer Centre and Cancer Research Division, Garvan Institute of Medical Research, 370 Victoria Street, Darlinghurst, Sydney, NSW, Australia. Liz.Musgrove@glasgow.ac.uk.
Background:
Although MYC is an attractive therapeutic target for breast cancer treatment, it has proven challenging to inhibit MYC directly, and clinically effective pharmaceutical agents targeting MYC are not yet available. An alternative approach is to identify genes that are synthetically lethal in MYC-dependent cancer. Recent studies have identified several cell cycle kinases as MYC synthetic-lethal genes. We therefore investigated the therapeutic potential of specific cyclin-dependent kinase (CDK) inhibition in MYC-driven breast cancer.
Methods:
Using small interfering RNA (siRNA), MYC expression was depleted in 26 human breast cancer cell lines and cell proliferation evaluated by BrdU incorporation. MYC-dependent and MYC-independent cell lines were classified based on their sensitivity to siRNA-mediated MYC knockdown. We then inhibited CDKs including CDK4/6, CDK2 and CDK1 individually using either RNAi or small molecule inhibitors, and compared sensitivity to CDK inhibition with MYC dependence in breast cancer cells.
Results:
Breast cancer cells displayed a wide range of sensitivity to siRNA-mediated MYC knockdown. The sensitivity was correlated with MYC protein expression and MYC phosphorylation level. Sensitivity to siRNA-mediated MYC knockdown did not parallel sensitivity to the CDK4/6 inhibitor PD0332991; instead MYC-independent cell lines were generally sensitive to PD0332991. Cell cycle arrest induced by MYC knockdown was accompanied by a decrease in CDK2 activity, but inactivation of CDK2 did not selectively affect the viability of MYC-dependent breast cancer cells. In contrast, CDK1 inactivation significantly induced apoptosis and reduced viability of MYC-dependent cells but not MYC- independent cells. This selective induction of apoptosis by CDK1 inhibitors was associated with up-regulation of the pro-apoptotic molecule BIM and was p53-independent.
Conclusions:
Overall, these results suggest that further investigation of CDK1 inhibition as a potential therapy for MYC-dependent breast cancer is warranted.
Insights
Targeting MYC in breast cancer is difficult. Researchers found that inhibiting cyclin-dependent kinase 1 (CDK1) selectively kills MYC-dependent breast cancer cells, offering a potential new therapy.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Therapeutics
Background:
- MYC is a challenging therapeutic target in breast cancer due to difficulties in direct inhibition.
- Identifying synthetic-lethal genes in MYC-dependent cancers offers an alternative therapeutic strategy.
- Cell cycle kinases have emerged as potential MYC synthetic-lethal genes.
Purpose of the Study:
- To investigate the therapeutic potential of specific cyclin-dependent kinase (CDK) inhibition in MYC-driven breast cancer.
- To determine if CDK inhibition is synthetically lethal in MYC-dependent breast cancer cells.
Main Methods:
- Depleted MYC expression using small interfering RNA (siRNA) in 26 human breast cancer cell lines.
- Assessed cell proliferation via BrdU incorporation and classified cell lines based on MYC dependence.
- Inhibited CDKs (CDK4/6, CDK2, CDK1) individually using RNAi or small molecule inhibitors.
Main Results:
- MYC knockdown sensitivity varied among breast cancer cell lines, correlating with MYC expression and phosphorylation.
- CDK4/6 inhibition (PD0332991) showed sensitivity in MYC-independent, not MYC-dependent, cell lines.
- CDK1 inactivation selectively induced apoptosis and reduced viability in MYC-dependent cells, independent of p53, via BIM upregulation.
Conclusions:
- CDK1 inactivation demonstrates selective efficacy against MYC-dependent breast cancer cells.
- CDK1 inhibition warrants further investigation as a potential therapeutic strategy for MYC-driven breast cancer.
More Related Videos
10:33Development of Inhibitors of Protein-protein Interactions through REPLACE: Application to the Design and Development Non-ATP Competitive CDK Inhibitors
Published on: October 26, 2015
09:09Preparation of Primary Acute Lymphoblastic Leukemia Cells in Different Cell Cycle Phases by Centrifugal Elutriation
Published on: November 10, 2017
Related Concept Videos
Inhibition of Cdk Activity
Inhibition of CDK Activity
M-Cdk Drives Transition Into Mitosis
Cyclin-dependent kinases, or Cdks, work in concert with cyclins to control cell cycle transitions. M-Cdk, a complex of Cdk1 bound to M cyclin, is a well-known example of this coordinated control that drives the transition from the G2 to the M phase.
M cyclin...
M-Cdk Drives Transition Into Mitosis
Positive Regulator Molecules
Positive Regulator Molecules