Related Experiment Video
Updated: May 3, 2026

Hemogenic Reprogramming of Human Fibroblasts by Enforced Expression of Transcription Factors
Published on: November 4, 2019
Foxd1 is a mediator and indicator of the cell reprogramming process
Makito Koga1, Mitsuhiro Matsuda1, Teruhisa Kawamura2
11] RIKEN Center for Developmental Biology, Kobe 650-0047, Japan [2] Career-Path Promotion Unit for Young Life Scientists, Kyoto University, Kyoto 606-8501, Japan [3] Graduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan.
Two transcription factors, Foxd1 and Foxo1, mediate gene expression changes during cell reprogramming. Foxd1 acts as both a mediator and indicator of successful induced pluripotent stem cell (iPSC) generation.
Area of Science:
- * Molecular Biology
- * Developmental Biology
- * Stem Cell Biology
Background:
- * The precise mechanisms driving gene expression changes during cell reprogramming to a pluripotent state are not fully understood.
- * Identifying key regulators is crucial for improving reprogramming efficiency and understanding pluripotency maintenance.
Purpose of the Study:
- * To identify transcription factors involved in mediating gene expression changes during cell reprogramming.
- * To elucidate the role of Foxd1 and Foxo1 in the generation of induced pluripotent stem cells (iPSCs).
Main Methods:
- * Gene knockdown experiments targeting Foxd1 and Foxo1.
- * Gene knockout studies for Foxd1.
- * Analysis of downstream transcriptional events, including Dax1 expression.
- * Fate mapping analyses to trace the origin of iPSC colonies.
Main Results:
- * Knockdown of Foxd1 or Foxo1 significantly reduced the number of generated iPSCs.
- * Double knockdown of Foxd1 and Foxo1 further diminished iPSC formation.
- * Foxd1 knockout impaired downstream transcriptional events, such as Dax1 expression, essential for pluripotency.
- * Transient upregulation of Foxd1 was observed in cells progressing towards an iPSC fate.
- * Fate mapping confirmed that over 95% of iPSC colonies originated from Foxd1-positive cells.
Conclusions:
- * Foxd1 and Foxo1 are critical mediators of gene expression reprogramming.
- * Foxd1 functions as both a key mediator and a reliable indicator of successful reprogramming to pluripotency.
- * Foxd1's transient expression marks cells committed to an iPSC fate.
Related Concept Videos
Methods of Nuclear Reprogramming
Somatic to iPS Cell Reprogramming
Master Transcription Regulators
Chromatin Modification in iPS Cells
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Forced Transdifferentiation
Artificial...
Combinatorial Gene Control
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...

