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Updated: May 2, 2026

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A Reporter Based Cellular Assay for Monitoring Splicing Efficiency
Published on: September 15, 2021
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Introduction to cotranscriptional RNA splicing.
Evan C Merkhofer1, Peter Hu, Tracy L Johnson
1Molecular Biology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.
Methods in Molecular Biology (Clifton, N.J.)
|February 20, 2014
Summary
Cotranscriptional splicing, where gene splicing occurs during transcription, is vital for gene expression. This process intricately links transcription and splicing, influencing gene regulation across organisms.
Area of Science:
- Molecular Biology
- Genetics
- Gene Expression
Background:
- The discovery of cotranscriptional splicing reveals a deep connection between transcription and RNA splicing.
- This process is conserved across various organisms and influences both constitutive and alternative splicing pathways.
Purpose of the Study:
- To explore the mechanisms and consequences of cotranscriptional splicing.
- To introduce methods for measuring cotranscriptional splicing.
Main Methods:
- Literature review of existing research on cotranscriptional splicing.
- Discussion of experimental techniques used to study the transcription-splicing linkage.
Main Results:
- Cotranscriptional splicing significantly impacts gene expression by coordinating transcription and splicing.
- Evidence suggests a bidirectional regulatory relationship where transcription affects splicing, and splicing, in turn, influences transcription.
Conclusions:
- Cotranscriptional splicing is a fundamental process in gene regulation with broad implications.
- Understanding this interplay is crucial for comprehending gene expression control and developing new research tools.
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