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Updated: May 2, 2026

A 96 Well Microtiter Plate-based Method for Monitoring Formation and Antifungal Susceptibility Testing of Candida albicans Biofilms
Published on: October 21, 2010
Paradoxical antifungal activity and structural observations in biofilms formed by echinocandin-resistant Candida
Carla J Walraven1,2, Stella M Bernardo1,2, Nathan P Wiederhold3,4
1University of New Mexico Health Science Center, Albuquerque, Albuquerque, New Mexico, USA.
Abstract:
Echinocandin-resistant clinical isolates of Candida albicans have been reported, and key-hot spot mutations in the FKS1 gene, which encodes a major glucan synthase subunit, have been identified in these (caspofungin-resistant [CAS-R]) strains. Although these mutations result in phenotypic resistance to echinocandins in planktonic cells, there is little data on antifungal susceptibilities of CAS-R C. albicans strains within biofilms. Thus, we analyzed biofilms formed by 12 C. albicans CAS-R clinical strains in which we previously identified FKS1 hot-spot mutations and compared the sessile antifungal and paradoxical activity of anidulafungin (ANID), caspofungin (CAS), and micafungin (MICA). Biofilms were formed in a 96-well static microplate model and assayed using both tetrazolium-salt reduction and crystal violet assays, as well as examination by scanning electron microscopy. We first sought to assess biofilm formation and structure in these fks1 mutants and found that the biofilm mass and metabolic activities were reduced in most of the fks1 mutants as compared with reference strain SC5314. Structural analyses revealed that the fks1 mutant biofilms were generally less dense and had a clear predominance of yeast and pseudohyphae, with unusual "pit"-like cell surface structures. We also noted that sessile minimum inhibitory concentrations (MICs) to ANID, CAS, and MICA were higher than planktonic MICs of all but one strain. The majority of strains demonstrated a paradoxical effect (PE) to particular echinocandins, in either planktonic or sessile forms. Overall, biofilms formed by echinocandin-resistant clinical isolates demonstrated varied PEs to echinocandins and were structurally characterized by a preponderance of yeast, pseudohyphae, and pit-like structures.
Insights
Echinocandin-resistant Candida albicans biofilms show altered structures and varied paradoxical effects to antifungals. These resistant strains, with FKS1 mutations, exhibit reduced biofilm mass and unique cell surface pits.
Area of Science:
- Mycology
- Antimicrobial Resistance
- Medical Microbiology
Background:
- Echinocandin resistance in Candida albicans is linked to FKS1 mutations.
- FKS1 mutations confer resistance in planktonic cells but biofilm data is limited.
- Understanding resistance in biofilms is crucial for effective treatment.
Purpose of the Study:
- To analyze antifungal susceptibility and paradoxical effects of echinocandins in biofilms of FKS1-mutated Candida albicans.
- To characterize the structure and formation of biofilms by these resistant strains.
- To compare biofilm and planktonic antifungal activity.
Main Methods:
- 12 clinical Candida albicans strains with FKS1 hot-spot mutations were used.
- Biofilms were formed in a 96-well static microplate model.
- Antifungal susceptibility (MICs), paradoxical effect, biofilm mass, and structure (SEM) were assessed.
Main Results:
- Most FKS1 mutants showed reduced biofilm mass and metabolic activity compared to reference strain.
- Biofilms exhibited less density, a predominance of yeast/pseudohyphae, and unique pit-like structures.
- Sessile MICs were higher than planktonic MICs for most strains; paradoxical effects were common.
Conclusions:
- Candida albicans biofilms with FKS1 mutations display altered structural characteristics.
- These biofilms exhibit varied paradoxical effects to echinocandins (anidulafungin, caspofungin, micafungin).
- FKS1 mutations impact biofilm formation and antifungal susceptibility, necessitating further investigation.
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