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Updated: May 2, 2026

Genetic Variant Detection in the CALR gene using High Resolution Melting Analysis
Published on: August 26, 2020
How do we identify RHD variants using a practical molecular approach?
Carine Prisco Arnoni1, Flavia Roche Moreira Latini, Janaína Guilhem Muniz
1Colsan-Associação Beneficente de Coleta de Sangue, São Paulo, SP, Brazil.
RhD genotyping resolves serologic discrepancies caused by partial D or weak D phenotypes. This study developed a cost-effective algorithm using molecular tests to identify 22 different RhD variants in diverse populations.
Area of Science:
- Immunogenetics
- Molecular Biology
- Transfusion Medicine
Background:
- Serologic discrepancies in RhD typing, particularly those involving partial D and weak D phenotypes, present challenges in routine blood banking.
- RHD genotyping offers superior characterization of RhD variants compared to traditional serologic methods.
Purpose of the Study:
- To develop and validate algorithms for identifying RhD variants in multiethnic populations.
- To establish a logic sequence of molecular tests for efficient and cost-effective RhD variant characterization.
Main Methods:
- Analysis of 360 blood samples exhibiting atypical D antigen expression.
- Utilized a multiplex polymerase chain reaction (PCR) procedure.
- Developed a six-flowchart algorithm incorporating PCR-restriction fragment length polymorphism and specific exon sequencing based on multiplex PCR results, RHCE allele, and D variant frequency.
Main Results:
- Successfully identified 22 distinct RhD variants using the developed algorithm with minimal assays and reduced cost.
- Demonstrated that comprehensive sequencing of all RHD exons is not essential for identifying most known D variants.
Conclusions:
- A practical and implementable algorithm for RHD genotyping has been established.
- The algorithm is adaptable to various ethnic backgrounds, requiring initial assessment of local D variant types and frequencies.
- This molecular strategy significantly improves the resolution of RhD discrepancies in transfusion medicine.
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