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Following in Real Time the Impact of Pneumococcal Virulence Factors in an Acute Mouse Pneumonia Model Using Bioluminescent Bacteria
Published on: February 23, 2014
Increased constituent ratios of Klebsiella sp., Acinetobacter sp., and Streptococcus sp. and a decrease in microflora
1Department of Neonatology, Children's Hospital of Chongqing Medical University, Chongqing, China ; Pediatrics Research Institution, Children's Hospital of Chongqing Medical University, Chongqing, China ; Ministry of Education Key Laboratory of Child Development and Disorder, Children's Hospital of Chongqing Medical University, Chongqing, China.
Abstract:
Ventilator-associated pneumonia (VAP) is a common complication and cause of death in neonates on mechanical ventilation. However, it is difficult to define the causes of VAP. To understand the causes of VAP, we undertook a prospective study based on the diversity of the microflora in VAP. The experimental group consisted of newborns who suffered from respiratory distress syndrome (RDS) and VAP, while the control group suffered from RDS without VAP. Sputa were collected within 1, 3, and 5 days of ventilation and were divided into six groups. DNA was extracted from the samples, and the 16S rDNA was PCR amplified, separated using denaturing gradient gel electrophoresis (DGGE), cloned and sequenced. The resulting sequences were compared using BLAST. The DGGE pictures were measured, and the richness, Shannon-Wiener index, and cluster maps were analyzed. No differences were found regarding the constituent ratio of any genus between the Non-VAP and VAP group within 1 day after intubation. After 1 to 3 days, the constituent ratios of Klebsiella sp., Acinetobacter sp., and Streptococcus sp. in the VAP group were higher than those in the Non-VAP group, and the ratios of Serratia sp. and Achromobacter sp. were lower. After 3 to 5 days, the ratios of Klebsiella sp., Acinetobacter sp., Serratia sp., and Achromobacter sp. were lower than those in the Non-VAP group. The richness and Shannon-Wiener index of the Non-VAP group were higher than those of the VAP group from 1 to 3 days after intubation, while no differences were found within 1 day and from 3 to 5 days. We conclude that during the first three days of intubation, the microflora diversity in the lower respiratory tract was reduced due to VAP, and the greater constituent ratios of Klebsiella sp., Acinetobacter sp., and Streptococcus sp. in the sputum may be indicators of VAP.
Insights
Ventilator-associated pneumonia (VAP) in neonates reduces lower respiratory tract microflora diversity within three days. Increased Klebsiella, Acinetobacter, and Streptococcus may indicate VAP development in infants on mechanical ventilation.
Area of Science:
- Neonatal critical care
- Microbiology
- Genomics
Background:
- Ventilator-associated pneumonia (VAP) is a significant cause of mortality in neonates requiring mechanical ventilation.
- Defining the specific causes of VAP in this vulnerable population remains challenging.
- Understanding the microbial shifts associated with VAP is crucial for diagnosis and treatment.
Purpose of the Study:
- To investigate the dynamic changes in lower respiratory tract microflora diversity in neonates with and without VAP.
- To identify potential microbial indicators for early VAP detection in infants with respiratory distress syndrome (RDS).
Main Methods:
- Prospective study comparing neonates with RDS and VAP (experimental group) to those with RDS alone (control group).
- Sputum samples collected at 1, 3, and 5 days post-intubation.
- 16S rDNA gene sequencing (PCR amplification, DGGE, cloning, sequencing) to analyze microbial composition and diversity.
- Bioinformatic analysis (BLAST) and statistical evaluation of microbial richness and diversity indices (Shannon-Wiener).
Main Results:
- No significant differences in microbial genus ratios between VAP and non-VAP groups within the first day of ventilation.
- Between days 1-3, VAP group showed increased ratios of Klebsiella spp., Acinetobacter spp., and Streptococcus spp., with decreased Serratia spp. and Achromobacter spp. compared to controls.
- Microbial richness and Shannon-Wiener diversity index were lower in the VAP group from days 1-3.
- After 3-5 days, microbial ratios shifted, with decreased Klebsiella spp., Acinetobacter spp., Serratia spp., and Achromobacter spp. in the VAP group.
Conclusions:
- VAP is associated with reduced lower respiratory tract microflora diversity in neonates during the initial three days of mechanical ventilation.
- Elevated levels of Klebsiella spp., Acinetobacter spp., and Streptococcus spp. in sputum may serve as early indicators of VAP in neonates.
- Further research into these microbial shifts can inform diagnostic strategies and targeted interventions for VAP.
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